Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318225

Identifier: 74318225

GI number: 74318225

Start: 2287280

End: 2288152

Strand: Reverse

Name: 74318225

Synonym: Tbd_2207

Alternate gene names: NA

Gene position: 2288152-2287280 (Counterclockwise)

Preceding gene: 74318226

Following gene: 74318224

Centisome position: 78.64

GC content: 68.27

Gene sequence:

>873_bases
ATGACGCGCGGCGACGGGCGTTTCGTCTCCCGCCCCGTGCCGAGGCTCGCCGCGGGACTTCTCGCGCTCGGCGTGCACCT
GCTCTTCGTGTTGCTGCTCGTGTTCGGCGTGTCGTGGCAGACGCGGCATCCCGCGCCGGTAACGGTCGACCTCTGGGAAT
CGATCCCGCAACCGCCGGCACCCCGTCCACCCGTGCCGGCGCCGCCCCCGCCCGAGCCGCCGCAGCCCGCGCCGCGGCCG
GTCCCCGAACCCGAAGTGAAGAATGAGCCCCCGCCGCCGAAGGCGCCCGACATCGCGCTCGAGAAGAAAAAGGCCGCGGC
GGCGAAGGCGGCCGCGCTGGAAAAAGCCGCATTAGAAAAAGCGGCGCAGGAAAAGGCAGCGCAGGAAAAGGCAGCGCAGG
AAAAGGCAGCGCAGCAAAAAGCTGAACAGGAAAAGGCCGCCGCGCAGAGAAAACGCGACCTGCTGCGGCAGATGGAGGAA
GAGGACGCGATACGGCGGATGGCCGACGAAGAGGCGGCGAATCAGGCGCGTCTGCTGAAGCAGGCGGAAGCGAAAGCGGC
CGCCGGCGCGCGGCAGAGCGAAATCGCCCGTCTCGTCGGGCAGCATCGCGATCTCATCAGCGCCAAGGTGCGCGGCAATA
CGCGCCTGCCCGACAACCTGGCCGGCAATCCCGAAGTGCGATGCCTGGTCAGGCTGCTTCCGACAGGCGAAGTGCAGAGC
GTGCGGGTGACGCGTTCGAGCGGCAACCCCGCGTACGACGACGCCGTCAAGCGCGCGATCGAGAAATCCTCGCCTTTGCC
CTTGCCCGCCGACCGCGATGCGCGGGCCGAGTTCGTGCCGGAACTTTCCTTCGTACATCGCCCTAAGGAGTGA

Upstream 100 bases:

>100_bases
CGGCCGACAAGAACGTCCGCTACGACGAAGTGATGAAGACCATGACGCTTCTTCAGCGCGAGCAGATCACGCGCATCGGC
CTGCTCGCCCGGCCTGCGCC

Downstream 100 bases:

>100_bases
GCTGTAGCGCCCCGTGGGGCGCCACGCCGCCGCCGGCCTGGCCTGAAGGCCTGTGCTAAACTCACCCGCCAACCCTGTGC
TAGCGAACAAGATGCCTGTA

Product: putative TonB protein

Products: NA

Alternate protein names: NB C-Terminal; LA-Related Transport Transmembrane Protein; NB Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTRGDGRFVSRPVPRLAAGLLALGVHLLFVLLLVFGVSWQTRHPAPVTVDLWESIPQPPAPRPPVPAPPPPEPPQPAPRP
VPEPEVKNEPPPPKAPDIALEKKKAAAAKAAALEKAALEKAAQEKAAQEKAAQEKAAQQKAEQEKAAAQRKRDLLRQMEE
EDAIRRMADEEAANQARLLKQAEAKAAAGARQSEIARLVGQHRDLISAKVRGNTRLPDNLAGNPEVRCLVRLLPTGEVQS
VRVTRSSGNPAYDDAVKRAIEKSSPLPLPADRDARAEFVPELSFVHRPKE

Sequences:

>Translated_290_residues
MTRGDGRFVSRPVPRLAAGLLALGVHLLFVLLLVFGVSWQTRHPAPVTVDLWESIPQPPAPRPPVPAPPPPEPPQPAPRP
VPEPEVKNEPPPPKAPDIALEKKKAAAAKAAALEKAALEKAAQEKAAQEKAAQEKAAQQKAEQEKAAAQRKRDLLRQMEE
EDAIRRMADEEAANQARLLKQAEAKAAAGARQSEIARLVGQHRDLISAKVRGNTRLPDNLAGNPEVRCLVRLLPTGEVQS
VRVTRSSGNPAYDDAVKRAIEKSSPLPLPADRDARAEFVPELSFVHRPKE
>Mature_289_residues
TRGDGRFVSRPVPRLAAGLLALGVHLLFVLLLVFGVSWQTRHPAPVTVDLWESIPQPPAPRPPVPAPPPPEPPQPAPRPV
PEPEVKNEPPPPKAPDIALEKKKAAAAKAAALEKAALEKAAQEKAAQEKAAQEKAAQQKAEQEKAAAQRKRDLLRQMEEE
DAIRRMADEEAANQARLLKQAEAKAAAGARQSEIARLVGQHRDLISAKVRGNTRLPDNLAGNPEVRCLVRLLPTGEVQSV
RVTRSSGNPAYDDAVKRAIEKSSPLPLPADRDARAEFVPELSFVHRPKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31490; Mature: 31359

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGDGRFVSRPVPRLAAGLLALGVHLLFVLLLVFGVSWQTRHPAPVTVDLWESIPQPPA
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC
PRPPVPAPPPPEPPQPAPRPVPEPEVKNEPPPPKAPDIALEKKKAAAAKAAALEKAALEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAQEKAAQEKAAQEKAAQQKAEQEKAAAQRKRDLLRQMEEEDAIRRMADEEAANQARLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEAKAAAGARQSEIARLVGQHRDLISAKVRGNTRLPDNLAGNPEVRCLVRLLPTGEVQS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
VRVTRSSGNPAYDDAVKRAIEKSSPLPLPADRDARAEFVPELSFVHRPKE
EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRGDGRFVSRPVPRLAAGLLALGVHLLFVLLLVFGVSWQTRHPAPVTVDLWESIPQPPA
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC
PRPPVPAPPPPEPPQPAPRPVPEPEVKNEPPPPKAPDIALEKKKAAAAKAAALEKAALEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AAQEKAAQEKAAQEKAAQQKAEQEKAAAQRKRDLLRQMEEEDAIRRMADEEAANQARLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEAKAAAGARQSEIARLVGQHRDLISAKVRGNTRLPDNLAGNPEVRCLVRLLPTGEVQS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE
VRVTRSSGNPAYDDAVKRAIEKSSPLPLPADRDARAEFVPELSFVHRPKE
EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA