| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is pgpA [H]
Identifier: 74318212
GI number: 74318212
Start: 2275135
End: 2275614
Strand: Direct
Name: pgpA [H]
Synonym: Tbd_2194
Alternate gene names: 74318212
Gene position: 2275135-2275614 (Clockwise)
Preceding gene: 74318211
Following gene: 74318213
Centisome position: 78.19
GC content: 69.58
Gene sequence:
>480_bases TTGCGGCCTGATCTCAGATTCGTCTTCGCGCATCCGGCGCATGCGCTCGCCTTCGGCTTCGGCAGCGGCCTCGCGCCCAG GGCGCCGGGCACCGTCGGCACGCTGCTCGGCTTGCCCCTGTTCCTCCTGATCGCGGCGTCGGCGCCCGATCTCGCGAACC GCCTCGTGCTCGTCCTCGCCGCCTTCCTGCTCGGGATCTGGGCCTGCGCACGCACGGGGCGCGCGCTCGGCGTCGCGGAC CACGGCGGCATCGTGTGGGACGAGATCGTCGCCTTCGCGCTCGTCCTGCTGTTCACGCCGGCGGGATGGGCCTGGACCGC AGCCGCCTTCGCGCTGTTCCGCCTCTTCGATATCCTTAAACCCTGGCCGATCCGGCTCGCCGACCGGCGCCTCAAGAACG GTTTCGGCGTCATGTTCGACGATCTGCTCGCGGCGGCCTATGCGATCGCTGCGCTGAAAGGACTGCAATGGCTCGTGTGA
Upstream 100 bases:
>100_bases CCGGTGACCCGCGTCGGCCGTATCACCGCCGACCCCGGCCTGCAGGTCGTCGGCGCCGACGGCCATGCCCTCGCCATCAC CCGCACGGGCTACGACCATT
Downstream 100 bases:
>100_bases GCGACGAAGAACTACACCACCTCGCGGTCGAATTGAGCGAGAAGCTGCGCGCGCGCGGCTGGATGCTCGCCACTGCCGAA TCCTGCACCGGCGGCTGGGT
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLAAFLLGIWACARTGRALGVAD HGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILKPWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV
Sequences:
>Translated_159_residues MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLAAFLLGIWACARTGRALGVAD HGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILKPWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV >Mature_159_residues MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLAAFLLGIWACARTGRALGVAD HGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILKPWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV
Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=148, Percent_Identity=39.8648648648649, Blast_Score=122, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 17019; Mature: 17019
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLA CCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AFLLGIWACARTGRALGVADHGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILK HHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC PWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLA CCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AFLLGIWACARTGRALGVADHGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILK HHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC PWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]