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The map label for this gene is yhbU [H]

Identifier: 74318204

GI number: 74318204

Start: 2268158

End: 2269159

Strand: Reverse

Name: yhbU [H]

Synonym: Tbd_2186

Alternate gene names: 74318204

Gene position: 2269159-2268158 (Counterclockwise)

Preceding gene: 74318205

Following gene: 74318203

Centisome position: 77.98

GC content: 65.57

Gene sequence:

>1002_bases
ATGCCGCTTGATCTCGTCTGCCCGGCGGGCAGTCTCGTTTCGCTCAAGGCGGCGGTCGACAATGGCGCCGACGCCGTCTA
TATGGGATTTCGCGACAACACCAACGCGCGCGCCTTCCCCGGGCTCAATTTCGACGAGGCGCAGGCCGCGGAGGGACTGC
GCTACGCGCGCGACCGCGGGCGCAAGGTTCTGCTCGCGCTCAACACCTACCCGCAGAGCGACACCTGGACGCGCTGGACG
GGTGCCGTGGACCGCGCGGCGAAGCTCGGGATGGACGCGATCATCCTCGCCGACCCCGGGCTCATGCGCTACGCGGTCAA
ACACCATCCGCAGCTGCGGCTTCACCTCTCGGTGCAGGGTTCGGCGACGAGCTACGAAGCGGTCAATTTCTACCGCGAGC
ACTTCGGCGTCCAGCGCGCCGTGTTGCCGCGCGTGCTCTCGCTTCCGCAGGTCGAAAACGTCGTCATGCACACCGACGTC
GAAATCGAGTTGTTCGGCTTCGGCGGCCTGTGCGTCATGGTCGAGGGGCGCTGTCTGCTGTCGTCGTATTGCACGGGTGA
ATCGCCGAATTCGGCGGGGGTGTGCTCGCCGGCGAAGGCCGTGCAGTGGAAGGACACGCCGACGGGGCTGGAGTCGCGGC
TGAACGGCGTGCTGCTCGACCGTTACGGGAAGGATGAAAAAGCCGGCTATCCGACGCTGTGCAAGGGCCGCTTCGAAGTC
GGCGGCGAGACCTATTACGCGATCGAGGAGCCGACGAGTCTGAACACCCTCGATCTGTTGCCCGAGATGCTGAAGATGGG
GATCGCGGCGATCAAGATCGAAGGTCGCCAGCGCAGCCCGGCCTATGTCGCGCAGGTCACCAAAGTGTGGCGCGCGGCGA
TCGACGCGGTGAAGAAGGATGCCGTCGATTTCAAACCGACGCCGGCCTGGCAGGCCGAACTCAACAAGCTGTCGGAAGGG
CAGAGCCACACGCTCGGCGCCTACCACCGTCCCTGGAAGTGA

Upstream 100 bases:

>100_bases
GCCAAGAAATGGGACGTATTGAACGGCATCGCCGACGAACTGCTGCGCCGTGGCACGCGGCAAGGTTCGCGCGCGGCCGA
GCACTGGAAGGAGACGCATC

Downstream 100 bases:

>100_bases
GGCAGGCATGAATCTGAGTCTGGGTCCCCTCCTGTATTACTGGCCGCGCGACGACGTGCTCGCCTTCTACGGCGAGGCCG
CACATTGGCCGGTCGCGCGC

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPLDLVCPAGSLVSLKAAVDNGADAVYMGFRDNTNARAFPGLNFDEAQAAEGLRYARDRGRKVLLALNTYPQSDTWTRWT
GAVDRAAKLGMDAIILADPGLMRYAVKHHPQLRLHLSVQGSATSYEAVNFYREHFGVQRAVLPRVLSLPQVENVVMHTDV
EIELFGFGGLCVMVEGRCLLSSYCTGESPNSAGVCSPAKAVQWKDTPTGLESRLNGVLLDRYGKDEKAGYPTLCKGRFEV
GGETYYAIEEPTSLNTLDLLPEMLKMGIAAIKIEGRQRSPAYVAQVTKVWRAAIDAVKKDAVDFKPTPAWQAELNKLSEG
QSHTLGAYHRPWK

Sequences:

>Translated_333_residues
MPLDLVCPAGSLVSLKAAVDNGADAVYMGFRDNTNARAFPGLNFDEAQAAEGLRYARDRGRKVLLALNTYPQSDTWTRWT
GAVDRAAKLGMDAIILADPGLMRYAVKHHPQLRLHLSVQGSATSYEAVNFYREHFGVQRAVLPRVLSLPQVENVVMHTDV
EIELFGFGGLCVMVEGRCLLSSYCTGESPNSAGVCSPAKAVQWKDTPTGLESRLNGVLLDRYGKDEKAGYPTLCKGRFEV
GGETYYAIEEPTSLNTLDLLPEMLKMGIAAIKIEGRQRSPAYVAQVTKVWRAAIDAVKKDAVDFKPTPAWQAELNKLSEG
QSHTLGAYHRPWK
>Mature_332_residues
PLDLVCPAGSLVSLKAAVDNGADAVYMGFRDNTNARAFPGLNFDEAQAAEGLRYARDRGRKVLLALNTYPQSDTWTRWTG
AVDRAAKLGMDAIILADPGLMRYAVKHHPQLRLHLSVQGSATSYEAVNFYREHFGVQRAVLPRVLSLPQVENVVMHTDVE
IELFGFGGLCVMVEGRCLLSSYCTGESPNSAGVCSPAKAVQWKDTPTGLESRLNGVLLDRYGKDEKAGYPTLCKGRFEVG
GETYYAIEEPTSLNTLDLLPEMLKMGIAAIKIEGRQRSPAYVAQVTKVWRAAIDAVKKDAVDFKPTPAWQAELNKLSEGQ
SHTLGAYHRPWK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=58.3081570996979, Blast_Score=415, Evalue=1e-117,
Organism=Escherichia coli, GI1788397, Length=349, Percent_Identity=30.0859598853868, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI87081910, Length=314, Percent_Identity=27.3885350318471, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36575; Mature: 36444

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDLVCPAGSLVSLKAAVDNGADAVYMGFRDNTNARAFPGLNFDEAQAAEGLRYARDRG
CCCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
RKVLLALNTYPQSDTWTRWTGAVDRAAKLGMDAIILADPGLMRYAVKHHPQLRLHLSVQG
CEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEEEEECC
SATSYEAVNFYREHFGVQRAVLPRVLSLPQVENVVMHTDVEIELFGFGGLCVMVEGRCLL
CCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCEEEEEECCCHH
SSYCTGESPNSAGVCSPAKAVQWKDTPTGLESRLNGVLLDRYGKDEKAGYPTLCKGRFEV
HHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCEEEEECCCCCCCCCCCCEECCEEEC
GGETYYAIEEPTSLNTLDLLPEMLKMGIAAIKIEGRQRSPAYVAQVTKVWRAAIDAVKKD
CCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
AVDFKPTPAWQAELNKLSEGQSHTLGAYHRPWK
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLDLVCPAGSLVSLKAAVDNGADAVYMGFRDNTNARAFPGLNFDEAQAAEGLRYARDRG
CCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
RKVLLALNTYPQSDTWTRWTGAVDRAAKLGMDAIILADPGLMRYAVKHHPQLRLHLSVQG
CEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEEEEECC
SATSYEAVNFYREHFGVQRAVLPRVLSLPQVENVVMHTDVEIELFGFGGLCVMVEGRCLL
CCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCEEEEEEECCCEEEEEECCCHH
SSYCTGESPNSAGVCSPAKAVQWKDTPTGLESRLNGVLLDRYGKDEKAGYPTLCKGRFEV
HHHCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCEEEEECCCCCCCCCCCCEECCEEEC
GGETYYAIEEPTSLNTLDLLPEMLKMGIAAIKIEGRQRSPAYVAQVTKVWRAAIDAVKKD
CCCEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
AVDFKPTPAWQAELNKLSEGQSHTLGAYHRPWK
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]