| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yhbT [H]
Identifier: 74318201
GI number: 74318201
Start: 2266331
End: 2266783
Strand: Reverse
Name: yhbT [H]
Synonym: Tbd_2183
Alternate gene names: 74318201
Gene position: 2266783-2266331 (Counterclockwise)
Preceding gene: 74318202
Following gene: 74318199
Centisome position: 77.9
GC content: 70.86
Gene sequence:
>453_bases ATGCTGAATCTCGCCGTGCCGCCGCAGCTTGCCAAGGTCGTCGCCCGGCTTCCGCCCGCGCCACCGAGCATCGCGTTTTC GGCGGCGGCGAACCGGCTGCTGTGGCCCGCGCTGCAGGCCTTCGACTGGCAGCCGCTGGTCGGACGCCGCTACGCGATCC GCGTCAACGACCTCGGCCTCACGCTGCGTTTCACGGTGAGCGCGCGCGGCTTCGCGGCCGACAGCGGCACGCCCGACCTC ACGATCAGCGCGAGCGCACGCGATTTTCTGTTGCTGCTCGGACGCCGGGAAGACCCCGATACGCTGTTCTTCAGTCGACG CCTCGTCAGCGAGGGCGACACCGCGCTCGGGCTGACGGTCAAGAATCTGCTCGATGCGCTCGACCCCGACGCCGTTCTCG CGCAACTACCGGCGCCGCTCGCGCGCCTTGCGCGCCGGGTGCTCGCGGCCTAG
Upstream 100 bases:
>100_bases GAGCGCTACGGCGGCCGGCTCGGCCTGCAGCGCGTACGCCTGTACGAAACCCCGAACAACTGGGCCGACGCGACGCGCGC GGCCGATTGAGGAGCCTCCG
Downstream 100 bases:
>100_bases GGCCGCGGCGCTGTCGCCGTGGACGCGGTCAGGCAGGCAGCGCGACTTTGTCGTCGACGCTGAATTGATAGTCGTTGAAT ACGTGCTCGGCGCTCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLNLAVPPQLAKVVARLPPAPPSIAFSAAANRLLWPALQAFDWQPLVGRRYAIRVNDLGLTLRFTVSARGFAADSGTPDL TISASARDFLLLLGRREDPDTLFFSRRLVSEGDTALGLTVKNLLDALDPDAVLAQLPAPLARLARRVLAA
Sequences:
>Translated_150_residues MLNLAVPPQLAKVVARLPPAPPSIAFSAAANRLLWPALQAFDWQPLVGRRYAIRVNDLGLTLRFTVSARGFAADSGTPDL TISASARDFLLLLGRREDPDTLFFSRRLVSEGDTALGLTVKNLLDALDPDAVLAQLPAPLARLARRVLAA >Mature_150_residues MLNLAVPPQLAKVVARLPPAPPSIAFSAAANRLLWPALQAFDWQPLVGRRYAIRVNDLGLTLRFTVSARGFAADSGTPDL TISASARDFLLLLGRREDPDTLFFSRRLVSEGDTALGLTVKNLLDALDPDAVLAQLPAPLARLARRVLAA
Specific function: Unknown
COG id: COG3154
COG function: function code I; Putative lipid carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789547, Length=113, Percent_Identity=44.2477876106195, Blast_Score=80, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 - InterPro: IPR016830 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 16150; Mature: 16150
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLAVPPQLAKVVARLPPAPPSIAFSAAANRLLWPALQAFDWQPLVGRRYAIRVNDLGL CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCE TLRFTVSARGFAADSGTPDLTISASARDFLLLLGRREDPDTLFFSRRLVSEGDTALGLTV EEEEEEECCCEECCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEHHHH KNLLDALDPDAVLAQLPAPLARLARRVLAA HHHHHHCCHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MLNLAVPPQLAKVVARLPPAPPSIAFSAAANRLLWPALQAFDWQPLVGRRYAIRVNDLGL CCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCE TLRFTVSARGFAADSGTPDLTISASARDFLLLLGRREDPDTLFFSRRLVSEGDTALGLTV EEEEEEECCCEECCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEHHHH KNLLDALDPDAVLAQLPAPLARLARRVLAA HHHHHHCCHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]