Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318198

Identifier: 74318198

GI number: 74318198

Start: 2263034

End: 2264179

Strand: Reverse

Name: 74318198

Synonym: Tbd_2180

Alternate gene names: NA

Gene position: 2264179-2263034 (Counterclockwise)

Preceding gene: 74318199

Following gene: 74318197

Centisome position: 77.81

GC content: 63.44

Gene sequence:

>1146_bases
ATGAATAAGAAACTTTTTGCCGCCGTGTCGGCTGCATTGGCGGGCTTTGCCGCGAATGCTCACGCGACCAACGGCGACCA
GATGCTCGGCGTCACCGCGACCCAGTGGGGCATGGGCGGCGCCATCGTCGCCGCGCCCCAGGACGCGGCCACTCTGCTGT
ACAACCCGGCGGGCCTCGCCACGCTCGGCATCAAGGACGTGCGCTTCGACATGGGCGTCGGCGTGCTCAACCCGCCGCGC
AAGGTCAACGGCCAGGACAGCGATTCCGATTACTACCTAATGCCGGCGGGGGCGGTTGCGTTCAACGTCGACGACAAGCT
GTTTCTGGGCCTCAACATGGGCGGCGTTTCCGGCAGCGGCGTCGATTTTGCCGACGTGCGGCCCTTGCTCGCGGGCACGC
AGGCCGTGGTCACGACCAAGCAGTCCTACAAGATCGCCCCGGGCTTCGCCTACCGGTTCAGCGACCGGCTTGCGCTCGGG
GCCGCGCTGCAGATCGGCTATCAGAGCCTGGCGATCCACAACAACGCCTTCACCCTGCCGCAGACCCAGGTCTACGGCGT
CGGCATGAACGCGGGCGTGATCTATAAGTTCAACGAGGCTGTGCAGCTCGGCGCGAGCTGGACCAGCAAGACCAGCATGG
ACGAGTTCCAGTGGAACACCACCGCCGGCCCTTACAGCATGACGCTCGACATGCCGCAGGTCGTCGCGCTCGGCGTCGCC
TTCCGGCCCATGCCGGGCTTGCTGATCGAGGCCGACGTGAAGCGCATCGGCTTCCAGGACGTGCTGGATCGAGTCCCCTT
CGAGACCCCCGGCGGCGCGAGCACGATGAATTTCGGCTGGGACGACCAGACCGTTTATGCGATCGGCGTGCAGAAGCAGA
TCAACGACAAGACGACCGTGCGCGCGGGCTTCAACTACGGCAAATCGCCGATCGGTGAGGAAGACGTCGACAACAACATC
GGCTCGCTGGCGATCACCGAGAAACATCTCTCGCTCGGCATCACGCGCGAATTCAGCGACAAGGTGTCCGGCTCGTTGGC
CTATACCCGCGCTTTCCATAACGAGATCACCTCGAATACGGGAAGCAACACCACGATCGAGCTCGAGCAGAACATCGTCA
ATCTGCAGGTGAGTTACAAGTACTGA

Upstream 100 bases:

>100_bases
GCGTCGCCTGTCATCAGAAATTCCGCGGCACGCCGGGCGTGTCGTCGAATCTGCTGAGCCCGGTTCGGAAATAACCCACC
CCTGATCGAGGAGACTGAAT

Downstream 100 bases:

>100_bases
GCGGTGCGCCGGCTCCGGCCGGCCTCCGCGCATTTCCCGCCCCCCACGGGGCTTTTCACTCGGAGGTTCTCATGACCGTA
GACCGTATCGTGCACCTGAT

Product: long-chain fatty acid ABC transporter

Products: NA

Alternate protein names: Aromatic Hydrocarbon Degradation Protein; Long-Chain Fatty Acid ABC Transporter; Transporter Protein; Fatty Acid And Hydrocarbon Transporter; Fatty Acid/Hydrocarbon Transporter; OMPP1/FadL/dX Family Outer Membrane Protein

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNKKLFAAVSAALAGFAANAHATNGDQMLGVTATQWGMGGAIVAAPQDAATLLYNPAGLATLGIKDVRFDMGVGVLNPPR
KVNGQDSDSDYYLMPAGAVAFNVDDKLFLGLNMGGVSGSGVDFADVRPLLAGTQAVVTTKQSYKIAPGFAYRFSDRLALG
AALQIGYQSLAIHNNAFTLPQTQVYGVGMNAGVIYKFNEAVQLGASWTSKTSMDEFQWNTTAGPYSMTLDMPQVVALGVA
FRPMPGLLIEADVKRIGFQDVLDRVPFETPGGASTMNFGWDDQTVYAIGVQKQINDKTTVRAGFNYGKSPIGEEDVDNNI
GSLAITEKHLSLGITREFSDKVSGSLAYTRAFHNEITSNTGSNTTIELEQNIVNLQVSYKY

Sequences:

>Translated_381_residues
MNKKLFAAVSAALAGFAANAHATNGDQMLGVTATQWGMGGAIVAAPQDAATLLYNPAGLATLGIKDVRFDMGVGVLNPPR
KVNGQDSDSDYYLMPAGAVAFNVDDKLFLGLNMGGVSGSGVDFADVRPLLAGTQAVVTTKQSYKIAPGFAYRFSDRLALG
AALQIGYQSLAIHNNAFTLPQTQVYGVGMNAGVIYKFNEAVQLGASWTSKTSMDEFQWNTTAGPYSMTLDMPQVVALGVA
FRPMPGLLIEADVKRIGFQDVLDRVPFETPGGASTMNFGWDDQTVYAIGVQKQINDKTTVRAGFNYGKSPIGEEDVDNNI
GSLAITEKHLSLGITREFSDKVSGSLAYTRAFHNEITSNTGSNTTIELEQNIVNLQVSYKY
>Mature_381_residues
MNKKLFAAVSAALAGFAANAHATNGDQMLGVTATQWGMGGAIVAAPQDAATLLYNPAGLATLGIKDVRFDMGVGVLNPPR
KVNGQDSDSDYYLMPAGAVAFNVDDKLFLGLNMGGVSGSGVDFADVRPLLAGTQAVVTTKQSYKIAPGFAYRFSDRLALG
AALQIGYQSLAIHNNAFTLPQTQVYGVGMNAGVIYKFNEAVQLGASWTSKTSMDEFQWNTTAGPYSMTLDMPQVVALGVA
FRPMPGLLIEADVKRIGFQDVLDRVPFETPGGASTMNFGWDDQTVYAIGVQKQINDKTTVRAGFNYGKSPIGEEDVDNNI
GSLAITEKHLSLGITREFSDKVSGSLAYTRAFHNEITSNTGSNTTIELEQNIVNLQVSYKY

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40660; Mature: 40660

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLFAAVSAALAGFAANAHATNGDQMLGVTATQWGMGGAIVAAPQDAATLLYNPAGLA
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCCCEE
TLGIKDVRFDMGVGVLNPPRKVNGQDSDSDYYLMPAGAVAFNVDDKLFLGLNMGGVSGSG
EECEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEECCCCCCC
VDFADVRPLLAGTQAVVTTKQSYKIAPGFAYRFSDRLALGAALQIGYQSLAIHNNAFTLP
CCHHHCCHHHCCCEEEEEECCCEEECCCEEEEECCCHHEHHHHHCCCEEEEEECCEEECC
QTQVYGVGMNAGVIYKFNEAVQLGASWTSKTSMDEFQWNTTAGPYSMTLDMPQVVALGVA
CCEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCEEECCCCCCEEEEECCHHHHHHCEE
FRPMPGLLIEADVKRIGFQDVLDRVPFETPGGASTMNFGWDDQTVYAIGVQKQINDKTTV
ECCCCCEEEECCHHHCCHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCEEE
RAGFNYGKSPIGEEDVDNNIGSLAITEKHLSLGITREFSDKVSGSLAYTRAFHNEITSNT
EECCCCCCCCCCCCHHCCCCCEEEEEEEHHEEEEEHHHHHHHCCCCHHHHHHHHHHHCCC
GSNTTIELEQNIVNLQVSYKY
CCCEEEEEECCEEEEEEEEEC
>Mature Secondary Structure
MNKKLFAAVSAALAGFAANAHATNGDQMLGVTATQWGMGGAIVAAPQDAATLLYNPAGLA
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCCCEE
TLGIKDVRFDMGVGVLNPPRKVNGQDSDSDYYLMPAGAVAFNVDDKLFLGLNMGGVSGSG
EECEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEECCCCCCC
VDFADVRPLLAGTQAVVTTKQSYKIAPGFAYRFSDRLALGAALQIGYQSLAIHNNAFTLP
CCHHHCCHHHCCCEEEEEECCCEEECCCEEEEECCCHHEHHHHHCCCEEEEEECCEEECC
QTQVYGVGMNAGVIYKFNEAVQLGASWTSKTSMDEFQWNTTAGPYSMTLDMPQVVALGVA
CCEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCEEECCCCCCEEEEECCHHHHHHCEE
FRPMPGLLIEADVKRIGFQDVLDRVPFETPGGASTMNFGWDDQTVYAIGVQKQINDKTTV
ECCCCCEEEECCHHHCCHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCEEE
RAGFNYGKSPIGEEDVDNNIGSLAITEKHLSLGITREFSDKVSGSLAYTRAFHNEITSNT
EECCCCCCCCCCCCHHCCCCCEEEEEEEHHEEEEEHHHHHHHCCCCHHHHHHHHHHHCCC
GSNTTIELEQNIVNLQVSYKY
CCCEEEEEECCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA