| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318194
Identifier: 74318194
GI number: 74318194
Start: 2260275
End: 2261417
Strand: Direct
Name: 74318194
Synonym: Tbd_2176
Alternate gene names: NA
Gene position: 2260275-2261417 (Clockwise)
Preceding gene: 74318193
Following gene: 74318195
Centisome position: 77.68
GC content: 73.14
Gene sequence:
>1143_bases ATGGTGTTGCCGGCGCTGGTATTGCTCGCCCTGACGGTGTTCGCGGCGGCCTTGCTGGCGTCGCCGCACGGCGGGCGCGC CGCCGTCCTGCACCTGGTATTTGCGCTCGGCGCCATGCCGCTGATATTCGGCGCGATGACGCACTTCATCCCGGTGCTCA CGCGCAGCCGCGGCGCACCGCCGCGGCTGGCCGCGATTCCGCTCGCGGCCATCGCCGCTGGCGCCCTCGTCGTCGGCTCG CTCGTCGACCCGCGTTTCGCGGGCGCCCGTCACGCCGCGGCCGGGCTCGGCCTCATGGCGACGACTGCCCTATTCGTCTG GAGCCGCGGCAGGCGACGGTCGATGCTCGGCCAGGCGCACCCCGGTCTCGCCTGGTACGACGCCGCGCTCGTCTGTCTCA CTCTCGCGCTCGCGGCGATTCTTGCCGGTGCGATCTGGCCGCAGCAGTGGGGTGCGCTGCGTCGCCTCCACGTTCACCTC AACACCATCGGTTTCGTCGGCATGACCGCGCTCGGCACGCTCGCGGTCCTGCTGCCCACCGCGAGCGGCAAGCCCGATCC CGAAGCGGGACCCTGGCTGCGCGCCGATCTGCCGCTCGCCCTGGGCGGCACGCTGCTGACGGCGATCGGCGCGGCGTGGG CGGAGCCGATCGCCTGGCTAGGTGCGCTGCTCTGGGGGGCGGTGCTGCTGCATGTCGGGCGGCGCTGGGCGCGCCGTTAT CGCGCCGACATCCTTTCGCTGCACGGCGCCGCGCCGCTGCTCGGTGCCGCCTGGGCCGGCCTGACGCTGAGCTTGGGCTT CGGCGTCGCCGACGCCGTTCCGGCTCTCGCCGCGTTCGACGCGCAACCGCTCTTCGCCTTCGTCGCCGGCTTTCTGCTGC CCCTCGTCTCGGGCGCAGCCAGCCAGTTGCTGCCCGTTTGGCTGCGCCCCGGTCAGCAGGGGCCGTGGCACGCCGACCTG CGCCGTCGCCTCGGTCGCTACGGCGGGGCGCGGGCTGGGCTCTTCCTCGTCGGCGGGATCGCGGCCGGGGTCGGCCTTGC CTGGGGGCTCGTGCTCGCGGCCGCGGTGCTGATCCTGTTCCTGCTACAAGTCGTGCTCGCGTTGGCTCACGGCACGTCCA TTCGCAAAAGGAGGCCCTCATGA
Upstream 100 bases:
>100_bases ACCAACTGCGCGCGCGCTACGGCGAGGGGGTCGAGATCCAGTACTTGCAGCGCGAGCCCGGGCAGATCGTGATCGACTTC ATTCGCAACTGAGTCTTTCC
Downstream 100 bases:
>100_bases ACACCCCGGCTTTTTTCGACGCTGCACCGCGCATCGCCGTATACGACCCGCTCGCCGAATTTCTCGGTGCCGCCGACGGC GGGCGGATCGAGTACGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAPPRLAAIPLAAIAAGALVVGS LVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAHPGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHL NTIGFVGMTALGTLAVLLPTASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAASQLLPVWLRPGQQGPWHADL RRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILFLLQVVLALAHGTSIRKRRPS
Sequences:
>Translated_380_residues MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAPPRLAAIPLAAIAAGALVVGS LVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAHPGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHL NTIGFVGMTALGTLAVLLPTASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAASQLLPVWLRPGQQGPWHADL RRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILFLLQVVLALAHGTSIRKRRPS >Mature_380_residues MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAPPRLAAIPLAAIAAGALVVGS LVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAHPGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHL NTIGFVGMTALGTLAVLLPTASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAASQLLPVWLRPGQQGPWHADL RRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILFLLQVVLALAHGTSIRKRRPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39306; Mature: 39306
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAP CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRLAAIPLAAIAAGALVVGSLVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAH CCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC PGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHLNTIGFVGMTALGTLAVLLPT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAA HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SQLLPVWLRPGQQGPWHADLRRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILF HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQVVLALAHGTSIRKRRPS HHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAP CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRLAAIPLAAIAAGALVVGSLVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAH CCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC PGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHLNTIGFVGMTALGTLAVLLPT CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAA HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SQLLPVWLRPGQQGPWHADLRRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILF HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQVVLALAHGTSIRKRRPS HHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA