| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318178
Identifier: 74318178
GI number: 74318178
Start: 2246139
End: 2246543
Strand: Direct
Name: 74318178
Synonym: Tbd_2160
Alternate gene names: NA
Gene position: 2246139-2246543 (Clockwise)
Preceding gene: 74318172
Following gene: 74318179
Centisome position: 77.19
GC content: 59.51
Gene sequence:
>405_bases TTGTCGCCCAGTCTGCCCCCGTCCGGCAGCCGGGCCTCGACCTATGCCGCGAAATCTTACGTCGCCGAAGAGCGGACGGG CGGGGCGGAACAGCGCTCGACGCGCAGAAACGCCGGACGTAAAAACGCCACCTCGAAGGTGGCGCTTCACTCACTCGACA TCGGCGATCAATGCCGGTTTTTGGCCGGTGCAGGCGCCTTGGGCGGCGTGATTAACGAGCCGATCGGAACGACGAGCTGT TTCGGCTTCTTCGGCTTCTTGGCTTCCTTGTTACCGCGTAACTGGCCTTTTGCCATGGGATTCTCCTTGCAGTGCCTCAG AAAGTATTCGGCTGGGTCTGTAAACGCAACTCAACCCAGACCGATCATAGGCCGATACGCCGAAATCGGTGGCTTTATTC CATGA
Upstream 100 bases:
>100_bases GCCCCTGCCCGTCAGCGATTTCATTCGTACGATTCCATCCCAAGCCTGGCGTCCTGCGCCGCCGTTACGCCGCCTCGATC GAGCCGGCCGGAGCCCGCCA
Downstream 100 bases:
>100_bases CCCGATGAATATCATGTGCATCTGAAAGAATCTCCCCCGGATCCCTCACCTGCCACACCGCCGAGGCATCTAGCCAGGAT ATTTGACGATTGCATAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRFLAGAGALGGVINEPIGTTSC FGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPRPIIGRYAEIGGFIP
Sequences:
>Translated_134_residues MSPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRFLAGAGALGGVINEPIGTTSC FGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPRPIIGRYAEIGGFIP >Mature_133_residues SPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRFLAGAGALGGVINEPIGTTSCF GFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPRPIIGRYAEIGGFIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14161; Mature: 14030
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRF CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHH LAGAGALGGVINEPIGTTSCFGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPR HHCCCHHCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC PIIGRYAEIGGFIP CHHHHHHHHCCCCC >Mature Secondary Structure SPSLPPSGSRASTYAAKSYVAEERTGGAEQRSTRRNAGRKNATSKVALHSLDIGDQCRF CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHH LAGAGALGGVINEPIGTTSCFGFFGFLASLLPRNWPFAMGFSLQCLRKYSAGSVNATQPR HHCCCHHCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC PIIGRYAEIGGFIP CHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA