| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318176
Identifier: 74318176
GI number: 74318176
Start: 2243785
End: 2244579
Strand: Reverse
Name: 74318176
Synonym: Tbd_2158
Alternate gene names: NA
Gene position: 2244579-2243785 (Counterclockwise)
Preceding gene: 74318177
Following gene: 74318175
Centisome position: 77.14
GC content: 65.91
Gene sequence:
>795_bases ATGCATCATGCATGCAGAAACCCCATTCGCGCGCGCATGGTCATCGCCACCTTCCGCTTCTACGAAGAACTGAACGATTT TCTCGCACCGGACCGCCGCAAGCGGGAATTCACCGTGCCCTGCGCGCGGGCGGCGACGACCAAACACATGATCGAGGCGC TCGGGGTGCCGCACACCGAAGTCGAGCTGATCCTGGTCAACGGCGAGTCGGCGGGTTTCGACCGTCGTCTGCAGGATGGC GACCGGGTCGCCGTCTATCCGCGCTTCGAGGCAATGGACGTCTCGCCGCTGCTGCGGGTCCGCGAGCGTCCGTTGCGCGA GACGCGTTTCGTCGCCGACGCGCACCTCGGCGGGCTCGCCCACATGCTGCGCATGCTCGGCTTCGATACGCTGTACGACA ATCATTTTCACGACGACGCGATCGTTGCGATCTGCGAACACGACGGCCGCATCGTGCTGACGCGCGACCGCGAACTGCTC AAGCGGCGCAGCGTCACCCACGGCTGCTACATCCATGCGCTGAAATCCGAGGCCCAGTTGCGCGAAGTCGTCGCGCGCCT CGATCTTGCGCGCAGTGCGCGGCCGTTCACGCGCTGCCTGCACTGCAACGTGCCGCTGCGCACGGTCGACAAGGCGAGCG TGCTCGACCGCCTGCCGCCTAAGGTGCGCGAGCACTACGCGCATTTTCCCACCTGCGACAGCTGTGGCCGCATCTACTGG GCGGGCTCCCACTGGCGCAACATGCGCCGCCTGCTCGACGACGTGCTGAGCGGTGAACGGGACAGCGGAACTTAG
Upstream 100 bases:
>100_bases TGGCGGGTCAACAGTTTTCACCTCGACGCCATGCTCTGGGCACAGCAGATCGGGGATTAGCGTCGAAACGCTGCGCCCGG TTGTGCAGGCGCGAGGGGCG
Downstream 100 bases:
>100_bases CGCGCGATGCGACCTCTCTCCCTCCTCCCGGCAAAAGAAAAAAAGCCCATGAAGACCGTAACACCGACGATACTCGCGAG CCTGATCGGCGCGCTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTEVELILVNGESAGFDRRLQDG DRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLAHMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELL KRRSVTHGCYIHALKSEAQLREVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW AGSHWRNMRRLLDDVLSGERDSGT
Sequences:
>Translated_264_residues MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTEVELILVNGESAGFDRRLQDG DRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLAHMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELL KRRSVTHGCYIHALKSEAQLREVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW AGSHWRNMRRLLDDVLSGERDSGT >Mature_264_residues MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTEVELILVNGESAGFDRRLQDG DRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLAHMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELL KRRSVTHGCYIHALKSEAQLREVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW AGSHWRNMRRLLDDVLSGERDSGT
Specific function: Unknown
COG id: COG1656
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30457; Mature: 30457
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCC VELILVNGESAGFDRRLQDGDRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLA EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH HMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELLKRRSVTHGCYIHALKSEAQL HHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHH REVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW HHHHHHHHHHHCCCHHHHHEECCCCHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEE AGSHWRNMRRLLDDVLSGERDSGT CCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCC VELILVNGESAGFDRRLQDGDRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLA EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH HMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELLKRRSVTHGCYIHALKSEAQL HHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHH REVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW HHHHHHHHHHHCCCHHHHHEECCCCHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEE AGSHWRNMRRLLDDVLSGERDSGT CCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA