| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is rseA [C]
Identifier: 74318112
GI number: 74318112
Start: 2185603
End: 2186160
Strand: Reverse
Name: rseA [C]
Synonym: Tbd_2094
Alternate gene names: 74318112
Gene position: 2186160-2185603 (Counterclockwise)
Preceding gene: 74318113
Following gene: 74318111
Centisome position: 75.13
GC content: 68.28
Gene sequence:
>558_bases ATGTCAGCACTCCACAGGTCCGATGCCTCCTCTCACGCCAACCAGGACGACAACGACGAGTCGCTGTTGTCCGCGCTGCT CGACGGCGAAAGCGGCCGCACCGAGAGCGGGGCGTTTCTCGCAGCGATGAGACAGGACGAGCGACTGCGACGAACCTGGT CCGAATACCACCTGATCGGCGACCTCATGCGCGGCGTCGGCCCGGCGCCGGAGGGCTTCATGGCGCGCTTTTCCGAGCGT CTCGCCGCCGAGCCGACCGTGCTCGCGCCGCAACGCCACATCTGGCCGCAGCGCGTCGTGGTCGCATCGCTCGCGTCGCT CGCGGTGTGGGGGGCGGTGTCGCTGACCGGACTCATGCCGAGCCAGACGCCGGAAAGCGCGCCGATCGCGAGTGCGCCGG CGAACCCCGGATTTCAGCAGGCAACCCTGGTGGCACCGGTCGAATACGATTCCGCGCAATTCGCGCCCTACGTCGTCGCG CATCAGGAGTTCGCGCCGAGCGCAGTGGCGACGCCGGTTTTTGAACCCGTCGTGGCAGTAGGCATGGAGCCGCGCTGA
Upstream 100 bases:
>100_bases CGATCGGAACCGTGCGTTCGCGGATCTTCCGTGCACGCGAGGCCATTGCCGAAAAAATACGCCCGATGCTGGGCACGAGT CAGGATAAAAGGTGGTAACC
Downstream 100 bases:
>100_bases TGCGGCGGTACAGGGTGGCGCGGCAAGCGGTGCTTGCCGCGGGCTTCGCCGGGCTCATGCTGCTGTCCGGCCTCGCGCGG GCAAACAGCGCCCTCGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSALHRSDASSHANQDDNDESLLSALLDGESGRTESGAFLAAMRQDERLRRTWSEYHLIGDLMRGVGPAPEGFMARFSER LAAEPTVLAPQRHIWPQRVVVASLASLAVWGAVSLTGLMPSQTPESAPIASAPANPGFQQATLVAPVEYDSAQFAPYVVA HQEFAPSAVATPVFEPVVAVGMEPR
Sequences:
>Translated_185_residues MSALHRSDASSHANQDDNDESLLSALLDGESGRTESGAFLAAMRQDERLRRTWSEYHLIGDLMRGVGPAPEGFMARFSER LAAEPTVLAPQRHIWPQRVVVASLASLAVWGAVSLTGLMPSQTPESAPIASAPANPGFQQATLVAPVEYDSAQFAPYVVA HQEFAPSAVATPVFEPVVAVGMEPR >Mature_184_residues SALHRSDASSHANQDDNDESLLSALLDGESGRTESGAFLAAMRQDERLRRTWSEYHLIGDLMRGVGPAPEGFMARFSERL AAEPTVLAPQRHIWPQRVVVASLASLAVWGAVSLTGLMPSQTPESAPIASAPANPGFQQATLVAPVEYDSAQFAPYVVAH QEFAPSAVATPVFEPVVAVGMEPR
Specific function: Negative Regulator Of Rpoe. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19792; Mature: 19661
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALHRSDASSHANQDDNDESLLSALLDGESGRTESGAFLAAMRQDERLRRTWSEYHLIG CCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLMRGVGPAPEGFMARFSERLAAEPTVLAPQRHIWPQRVVVASLASLAVWGAVSLTGLMP HHHHCCCCCCHHHHHHHHHHHHCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC SQTPESAPIASAPANPGFQQATLVAPVEYDSAQFAPYVVAHQEFAPSAVATPVFEPVVAV CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHH GMEPR CCCCC >Mature Secondary Structure SALHRSDASSHANQDDNDESLLSALLDGESGRTESGAFLAAMRQDERLRRTWSEYHLIG CCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DLMRGVGPAPEGFMARFSERLAAEPTVLAPQRHIWPQRVVVASLASLAVWGAVSLTGLMP HHHHCCCCCCHHHHHHHHHHHHCCCCEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC SQTPESAPIASAPANPGFQQATLVAPVEYDSAQFAPYVVAHQEFAPSAVATPVFEPVVAV CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHH GMEPR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA