| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318105
Identifier: 74318105
GI number: 74318105
Start: 2179477
End: 2179872
Strand: Reverse
Name: 74318105
Synonym: Tbd_2087
Alternate gene names: NA
Gene position: 2179872-2179477 (Counterclockwise)
Preceding gene: 74318106
Following gene: 74318104
Centisome position: 74.91
GC content: 63.64
Gene sequence:
>396_bases ATGGATTGCGCCTCCCTCCGCGCCGGGCAACGCGGCCTGAGCCTGTTCGGTTTCCTGTTCGTCATCGCCATGCTTGCGGT CGTCGCGCTGCTTGCGATGAAACTGGTGCCGGCCTACGTCGAGTTCTTCTCGGTCAAGAAGATCCTTGCCTCCATGGCGC AGGAACCGGACCTCAAGTCGAAGAGCAACGCCGACATCCGCAGTGATTTCATGAGGCGCGCGGGCGTCAGCTACGTCACG GTCGTGAAGCCCGAGGACCTCAAGATCGACCGGCAGGCCGGCGGTCCCGTCATCTCGGCCGAGTATGAGTTCCGCACCCA GCTCGTCGGCAACGTGAGCCTCGTGGTCGACTTCGCCGCGAGCACCGATCCCGCCGCCGTCCGCGACATTGAATAA
Upstream 100 bases:
>100_bases GAACATCGTCGGCAAGGCCTTTTTCATCTGGATGAACTTCGACGACTTCGGTCGAATCGGCACCACGATCCGATAATCAA CAAACAATCAAGGAGAACTC
Downstream 100 bases:
>100_bases CGCCTTGCTCGACGCGCGCCTGCAGCAGGCGCTCGGCTACACCTTCTCGCGTTCGGGCCTCCTGCAGCAGGCACTGACGC ATCGCAGCTACGGTGCGCTC
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MDCASLRAGQRGLSLFGFLFVIAMLAVVALLAMKLVPAYVEFFSVKKILASMAQEPDLKSKSNADIRSDFMRRAGVSYVT VVKPEDLKIDRQAGGPVISAEYEFRTQLVGNVSLVVDFAASTDPAAVRDIE
Sequences:
>Translated_131_residues MDCASLRAGQRGLSLFGFLFVIAMLAVVALLAMKLVPAYVEFFSVKKILASMAQEPDLKSKSNADIRSDFMRRAGVSYVT VVKPEDLKIDRQAGGPVISAEYEFRTQLVGNVSLVVDFAASTDPAAVRDIE >Mature_131_residues MDCASLRAGQRGLSLFGFLFVIAMLAVVALLAMKLVPAYVEFFSVKKILASMAQEPDLKSKSNADIRSDFMRRAGVSYVT VVKPEDLKIDRQAGGPVISAEYEFRTQLVGNVSLVVDFAASTDPAAVRDIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14233; Mature: 14233
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCASLRAGQRGLSLFGFLFVIAMLAVVALLAMKLVPAYVEFFSVKKILASMAQEPDLKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KSNADIRSDFMRRAGVSYVTVVKPEDLKIDRQAGGPVISAEYEFRTQLVGNVSLVVDFAA CCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEECHHHHHHHHHCCCEEEEEECC STDPAAVRDIE CCCCCCCCCCC >Mature Secondary Structure MDCASLRAGQRGLSLFGFLFVIAMLAVVALLAMKLVPAYVEFFSVKKILASMAQEPDLKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KSNADIRSDFMRRAGVSYVTVVKPEDLKIDRQAGGPVISAEYEFRTQLVGNVSLVVDFAA CCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEECHHHHHHHHHCCCEEEEEECC STDPAAVRDIE CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA