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The map label for this gene is ykoX [H]

Identifier: 74318099

GI number: 74318099

Start: 2174819

End: 2175427

Strand: Direct

Name: ykoX [H]

Synonym: Tbd_2081

Alternate gene names: 74318099

Gene position: 2174819-2175427 (Clockwise)

Preceding gene: 74318098

Following gene: 74318100

Centisome position: 74.74

GC content: 62.89

Gene sequence:

>609_bases
ATGCTCCACGACCTGATCCAGACCATCGTCAGCACCGTAGGCGCCTGGGGTTACCTCGGGATCTTCCTGATGATGGCCCT
CGAATCGAGCTTCTTCCCCTTCCCGAGCGAAGTGGTGATGATTCCTGCGGGCTATCTCGCCTACAAGGGCGAGATGAACA
TCGTGCTCGCGATCCTCGCGGGCATTGGCGGCAGCCTTTTCGGCGCCCTGTTCAACTACTGGCTGGCGCTCAAGCTCGGG
CGGCGCTTCCTGCTCCGCTACGGGCGCTATGTGCTCGTCAAGGAACACACGCTGCAGCGGATGGAGGATTTCTTCGCCCG
CCACGGTCACATCTCGACCTTCACCGGGCGTCTGATCCCCGCGGTGCGGCAGTACATCTCGCTCCCGGCGGGACTCGCGC
GCATGAACCTCGCCGTGTTCAGCTTCTACACGAGCCTCGGCGCCGGGATCTGGGTCACTATCCTCGCCGTGCTCGGCTAC
AGCCTCGGCCACAACGAGGCGGCGATCCGCGCCAATCTGCATCTGATTACGCTGATCACGCTCGGCGCGGTCGCGGTGAT
CGTGCTGCTCTACATCCGCCTCAAGCTCAAGAAGAAGGTGCTGCGCTAA

Upstream 100 bases:

>100_bases
GCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCCCCTAGCC
CCTAGCCCCTAGCCCCTGAA

Downstream 100 bases:

>100_bases
GCGGCGCGACCGGCGGCGTCGCCGCCTGGTCCGGCCCCGACCTGTCTCATTCGCGGAACAGGGCAGCTACCGGTTCCGCC
CTACTCCCCAGCGGTTCGCC

Product: putative integral membrane protein dedA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLHDLIQTIVSTVGAWGYLGIFLMMALESSFFPFPSEVVMIPAGYLAYKGEMNIVLAILAGIGGSLFGALFNYWLALKLG
RRFLLRYGRYVLVKEHTLQRMEDFFARHGHISTFTGRLIPAVRQYISLPAGLARMNLAVFSFYTSLGAGIWVTILAVLGY
SLGHNEAAIRANLHLITLITLGAVAVIVLLYIRLKLKKKVLR

Sequences:

>Translated_202_residues
MLHDLIQTIVSTVGAWGYLGIFLMMALESSFFPFPSEVVMIPAGYLAYKGEMNIVLAILAGIGGSLFGALFNYWLALKLG
RRFLLRYGRYVLVKEHTLQRMEDFFARHGHISTFTGRLIPAVRQYISLPAGLARMNLAVFSFYTSLGAGIWVTILAVLGY
SLGHNEAAIRANLHLITLITLGAVAVIVLLYIRLKLKKKVLR
>Mature_202_residues
MLHDLIQTIVSTVGAWGYLGIFLMMALESSFFPFPSEVVMIPAGYLAYKGEMNIVLAILAGIGGSLFGALFNYWLALKLG
RRFLLRYGRYVLVKEHTLQRMEDFFARHGHISTFTGRLIPAVRQYISLPAGLARMNLAVFSFYTSLGAGIWVTILAVLGY
SLGHNEAAIRANLHLITLITLGAVAVIVLLYIRLKLKKKVLR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22477; Mature: 22477

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHDLIQTIVSTVGAWGYLGIFLMMALESSFFPFPSEVVMIPAGYLAYKGEMNIVLAILA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEECCCHHHHHHHHH
GIGGSLFGALFNYWLALKLGRRFLLRYGRYVLVKEHTLQRMEDFFARHGHISTFTGRLIP
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVRQYISLPAGLARMNLAVFSFYTSLGAGIWVTILAVLGYSLGHNEAAIRANLHLITLIT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGAVAVIVLLYIRLKLKKKVLR
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHDLIQTIVSTVGAWGYLGIFLMMALESSFFPFPSEVVMIPAGYLAYKGEMNIVLAILA
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHEECCCHHHHHHHHH
GIGGSLFGALFNYWLALKLGRRFLLRYGRYVLVKEHTLQRMEDFFARHGHISTFTGRLIP
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVRQYISLPAGLARMNLAVFSFYTSLGAGIWVTILAVLGYSLGHNEAAIRANLHLITLIT
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGAVAVIVLLYIRLKLKKKVLR
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]