| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yggG [C]
Identifier: 74318095
GI number: 74318095
Start: 2170452
End: 2171462
Strand: Direct
Name: yggG [C]
Synonym: Tbd_2077
Alternate gene names: 74318095
Gene position: 2170452-2171462 (Clockwise)
Preceding gene: 74318094
Following gene: 74318096
Centisome position: 74.59
GC content: 71.91
Gene sequence:
>1011_bases GTGATCCGCTTCGCGGCGGATTACTTCGACGGCGAGACGTCGCGCGCGCACGCGGTCGAAGCCAGCGTCGACGCCGGCCA CCTGCGCGTGCGCGGCGGCGCCGTCGATTTCGCGGTGTCGCTCGACCGCGTCCAGGTCGCGCCGCCCGCAGGGCAAGCGC GCAGCGTCGTGCATCTGCCCGACGCGCGCGAGCTGCATAGCGCCGACGCCGCGGCGCTGCTCGAACTCAGCCGGCTCAGT GCATCCGCCCGCCCCGAACGCTGGGCGCATCTGCTCGAAAGCCGGCTGGGCTTTGCGCTTGCCGCGCTCGTCGTCTCGAT CCTCATCGTGACCGCCGGGCTGCGCTGGGGCGTGCCGGCCGTCGCGCAACTCGCCGCGCACGCGCTGCCCGGCTGGGTCG ACGAGCGGATCGGCGAAGAAGCGCTGGCGCTCATGGACGAACTCAGCCTGTCACCGAGCACGCTGCCAGCCGCGCGCCAA CAGGCCCTCACGCAGAAGATCGCCGACCAGTGCCGCAGGCAGACCTGTCCTTCCTACCGCTTGCTGTTCCGCGACAGCAA GCTCTTCGGCGCCAATGCCATGGCGCTTCCGGGCGGCACCGTGGTCGTGACCGATGCGCTGGTCGGGCTCGCCCGCCACG ACGAAGAGCTGCTCGCGGTCGTCGCGCACGAGCTCGGCCACGTCCGGCATCGCCACGGCCTGCGCATGGCGCTGCAAAGC CTTGGCGCCGGCGCGATCCTCGTTGCCGTCACGGGCGATATCGGCAGCGTCACCGACCTCGCCGCGGGGCTGCCGAGCCT GCGGCTGCAAAGTGGCTATTCGCGCGACATGGAACGCGAGGCCGACGCCTACGCGCTGGCCTGGCTGAACACGGCCTGCA TTCCGCCCACGCGTTTTGCCGCCATTCTCGGACGCATCGACGACGACGCCTCGGACACCGGCCTGCTCGACAGCCACCCC GGCACGCGCGAGCGGCTCGGACCCTTCCGCGGCCCGGGTCGGTGCCTCTGA
Upstream 100 bases:
>100_bases GCCCGCACGACCTCGGCGGCTTCGTCGCCGGCCAGCACCAGAGCAGCACCGCCACTGGCTCGGAGATGGCCGACCTGCTC GACCTCAATTTCGGGCTGAC
Downstream 100 bases:
>100_bases GGCCGCAATCGCCGCGTGCTAGAATCCGTGGGTTTTGACTCCACGCCCAACGCCATGATCTCGCTCGCCCACGCCCAGAC TGCCGCTCCCGCCGCCACGC
Product: putative Zn-dependent protease
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; M48 Family Peptidase; Zn-Dependent Protease; Zinc Metalloprotease With Chaperone Function; Metalloprotease Protein; Zinc Metalloendopeptidase; M48 Peptidase Family Protein; TPR Repeat-Containing Zn-Dependent Protease; Protease
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MIRFAADYFDGETSRAHAVEASVDAGHLRVRGGAVDFAVSLDRVQVAPPAGQARSVVHLPDARELHSADAAALLELSRLS ASARPERWAHLLESRLGFALAALVVSILIVTAGLRWGVPAVAQLAAHALPGWVDERIGEEALALMDELSLSPSTLPAARQ QALTQKIADQCRRQTCPSYRLLFRDSKLFGANAMALPGGTVVVTDALVGLARHDEELLAVVAHELGHVRHRHGLRMALQS LGAGAILVAVTGDIGSVTDLAAGLPSLRLQSGYSRDMEREADAYALAWLNTACIPPTRFAAILGRIDDDASDTGLLDSHP GTRERLGPFRGPGRCL
Sequences:
>Translated_336_residues MIRFAADYFDGETSRAHAVEASVDAGHLRVRGGAVDFAVSLDRVQVAPPAGQARSVVHLPDARELHSADAAALLELSRLS ASARPERWAHLLESRLGFALAALVVSILIVTAGLRWGVPAVAQLAAHALPGWVDERIGEEALALMDELSLSPSTLPAARQ QALTQKIADQCRRQTCPSYRLLFRDSKLFGANAMALPGGTVVVTDALVGLARHDEELLAVVAHELGHVRHRHGLRMALQS LGAGAILVAVTGDIGSVTDLAAGLPSLRLQSGYSRDMEREADAYALAWLNTACIPPTRFAAILGRIDDDASDTGLLDSHP GTRERLGPFRGPGRCL >Mature_336_residues MIRFAADYFDGETSRAHAVEASVDAGHLRVRGGAVDFAVSLDRVQVAPPAGQARSVVHLPDARELHSADAAALLELSRLS ASARPERWAHLLESRLGFALAALVVSILIVTAGLRWGVPAVAQLAAHALPGWVDERIGEEALALMDELSLSPSTLPAARQ QALTQKIADQCRRQTCPSYRLLFRDSKLFGANAMALPGGTVVVTDALVGLARHDEELLAVVAHELGHVRHRHGLRMALQS LGAGAILVAVTGDIGSVTDLAAGLPSLRLQSGYSRDMEREADAYALAWLNTACIPPTRFAAILGRIDDDASDTGLLDSHP GTRERLGPFRGPGRCL
Specific function: Seems To Regulate The Expression Of Speb. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 35732; Mature: 35732
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFAADYFDGETSRAHAVEASVDAGHLRVRGGAVDFAVSLDRVQVAPPAGQARSVVHLP CCEEECHHCCCCCCCHHEEECCCCCCEEEEECCCEEEEEEECCEEECCCCCCCCCEEECC DARELHSADAAALLELSRLSASARPERWAHLLESRLGFALAALVVSILIVTAGLRWGVPA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VAQLAAHALPGWVDERIGEEALALMDELSLSPSTLPAARQQALTQKIADQCRRQTCPSYR HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE LLFRDSKLFGANAMALPGGTVVVTDALVGLARHDEELLAVVAHELGHVRHRHGLRMALQS EEEECCCCCCCCEEECCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAGAILVAVTGDIGSVTDLAAGLPSLRLQSGYSRDMEREADAYALAWLNTACIPPTRFA CCCCEEEEEEECCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH AILGRIDDDASDTGLLDSHPGTRERLGPFRGPGRCL HHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MIRFAADYFDGETSRAHAVEASVDAGHLRVRGGAVDFAVSLDRVQVAPPAGQARSVVHLP CCEEECHHCCCCCCCHHEEECCCCCCEEEEECCCEEEEEEECCEEECCCCCCCCCEEECC DARELHSADAAALLELSRLSASARPERWAHLLESRLGFALAALVVSILIVTAGLRWGVPA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VAQLAAHALPGWVDERIGEEALALMDELSLSPSTLPAARQQALTQKIADQCRRQTCPSYR HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE LLFRDSKLFGANAMALPGGTVVVTDALVGLARHDEELLAVVAHELGHVRHRHGLRMALQS EEEECCCCCCCCEEECCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAGAILVAVTGDIGSVTDLAAGLPSLRLQSGYSRDMEREADAYALAWLNTACIPPTRFA CCCCEEEEEEECCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH AILGRIDDDASDTGLLDSHPGTRERLGPFRGPGRCL HHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA