| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318085
Identifier: 74318085
GI number: 74318085
Start: 2160411
End: 2161103
Strand: Reverse
Name: 74318085
Synonym: Tbd_2067
Alternate gene names: NA
Gene position: 2161103-2160411 (Counterclockwise)
Preceding gene: 74318086
Following gene: 74318083
Centisome position: 74.27
GC content: 61.62
Gene sequence:
>693_bases ATGACATCCACGCAACAGAAAAGCACCAACCTGAACGATGACCCGCGATTCTCTTCGGCAACCGCGCTTCTCGAGAAATT GAAAGCCGACTTGATGGCTGTCGAAAAGCAGATCGATGAGAATCTATCGGCCCTCTCTGCGGCATCTGCGGCCCGGCGCA ACAGGATCGAGGAACAGGCGCACGCCATGCTTGCCGGGCAGCCTGACGCGGCGCTCAATGCCAGTGTCGAGGCCGCGCGC ATCCGGGCAGACATCGAGGCCGCTCAACTCAAGCGCCCGGCCCTGCACCGCGCTATCGAATTGCAGCGCCAAGTTGTCGA ACAGCTTCGCGGCGAACTGCACGCAAAAATCTGCCGAGACCTGGCACCGAAACACGTCGGGCTTGTCCGGGAAATCGCGA CACGCCTGATCGACCTGGACGCGGCGCTTATGGCCGAGCGTGATCTGCGCGAAGAGATTTTTCATGGCACCGGCCTGCAT GGGCTGACACCCATGATGGTCGGCAATCTCGGGCTGTTGCGCGATGAATACAGCGGCTCGGCGTACTACCTGATCGAGTG CGCGAAGATAGGCTACCTCAAGAAGTCCGAACTGCCGGAACACCTGCGCGGCCGCGTGCCGAGCCAGGATCCGGCGCCGA CAGTCCAGAAACGGCAGGTCGACCCGGACGGCTGGCTTCACGCAACCGCTTAA
Upstream 100 bases:
>100_bases TGAACCTGCTGTGGGCGTTGCGTCGGCACGCCAGACAGCACAACAGCCATTCGGCAGCTGCAATGCCGGAAATCCAACCA ACCCGCCAAAGGAGCAGCAC
Downstream 100 bases:
>100_bases CCACTCATCACCGGAGGAGAACACCATGAAGGAAAGAGCAGACGATCACGCCGGCCCGAGGGCCACTGATCTGCGGAACT TCAAGCCGTTCCAGGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTSTQQKSTNLNDDPRFSSATALLEKLKADLMAVEKQIDENLSALSAASAARRNRIEEQAHAMLAGQPDAALNASVEAAR IRADIEAAQLKRPALHRAIELQRQVVEQLRGELHAKICRDLAPKHVGLVREIATRLIDLDAALMAERDLREEIFHGTGLH GLTPMMVGNLGLLRDEYSGSAYYLIECAKIGYLKKSELPEHLRGRVPSQDPAPTVQKRQVDPDGWLHATA
Sequences:
>Translated_230_residues MTSTQQKSTNLNDDPRFSSATALLEKLKADLMAVEKQIDENLSALSAASAARRNRIEEQAHAMLAGQPDAALNASVEAAR IRADIEAAQLKRPALHRAIELQRQVVEQLRGELHAKICRDLAPKHVGLVREIATRLIDLDAALMAERDLREEIFHGTGLH GLTPMMVGNLGLLRDEYSGSAYYLIECAKIGYLKKSELPEHLRGRVPSQDPAPTVQKRQVDPDGWLHATA >Mature_229_residues TSTQQKSTNLNDDPRFSSATALLEKLKADLMAVEKQIDENLSALSAASAARRNRIEEQAHAMLAGQPDAALNASVEAARI RADIEAAQLKRPALHRAIELQRQVVEQLRGELHAKICRDLAPKHVGLVREIATRLIDLDAALMAERDLREEIFHGTGLHG LTPMMVGNLGLLRDEYSGSAYYLIECAKIGYLKKSELPEHLRGRVPSQDPAPTVQKRQVDPDGWLHATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25364; Mature: 25233
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTQQKSTNLNDDPRFSSATALLEKLKADLMAVEKQIDENLSALSAASAARRNRIEEQA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAMLAGQPDAALNASVEAARIRADIEAAQLKRPALHRAIELQRQVVEQLRGELHAKICRD HHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPKHVGLVREIATRLIDLDAALMAERDLREEIFHGTGLHGLTPMMVGNLGLLRDEYSGS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHCCCCC AYYLIECAKIGYLKKSELPEHLRGRVPSQDPAPTVQKRQVDPDGWLHATA EEEEEEHHHHCCCCHHCCCHHHHCCCCCCCCCCCHHHCCCCCCCCEEECC >Mature Secondary Structure TSTQQKSTNLNDDPRFSSATALLEKLKADLMAVEKQIDENLSALSAASAARRNRIEEQA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAMLAGQPDAALNASVEAARIRADIEAAQLKRPALHRAIELQRQVVEQLRGELHAKICRD HHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPKHVGLVREIATRLIDLDAALMAERDLREEIFHGTGLHGLTPMMVGNLGLLRDEYSGS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHCCCCC AYYLIECAKIGYLKKSELPEHLRGRVPSQDPAPTVQKRQVDPDGWLHATA EEEEEEHHHHCCCCHHCCCHHHHCCCCCCCCCCCHHHCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA