| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is rnfG [H]
Identifier: 74318037
GI number: 74318037
Start: 2108942
End: 2109592
Strand: Direct
Name: rnfG [H]
Synonym: Tbd_2019
Alternate gene names: 74318037
Gene position: 2108942-2109592 (Clockwise)
Preceding gene: 74318036
Following gene: 74318038
Centisome position: 72.48
GC content: 71.43
Gene sequence:
>651_bases GTGAGCATGAGCGGAGCCGCCCGCAACGCGCTACGCGCGGGCACCGTACTCGTCGTCTTCGCCGTCGTCGGAACCGCGAT GCTCGCGTTCACCCACGGCCGCACCGAACCCGTCATCGCCCGCAGCCGGCAGGCCGAACAACTCGCGTTCATCGAGCAGG TCCTGCCGTCCCGGCTCTACGACAACGACCTGCTCGCGAGCGAACGCCGGGTGCCGCGTGACGCCATGCTCGGTACCCGG CGACCCTCGGCGGTCTGGGTCGCGCGGCGAGGCGACGCGTTCGCCGGCGTCGTCCTCGAAGCGGTCGCGCCCGACGGCTA CAGCGGGGACATCGGCCTGCTGGTCGGCATCGACGCGGCCGGAACGGTCACCGGCGTGCGCGTCACGGGCCATCGCGAAA CACCGGGGCTCGGCGACTACATCGACCGCGCGAAGAGCCCCTGGATCGAGCAGTTCACCGGCAAATCGCTCGACAATCCG CCGCCCCGCGCCTGGCGTGTCGCCAAGGACGGCGGCACCTTCGACACGCGCGCCGGCGCGACGATCACGCCGCGCGCGGT GGTCAAGGCGGTTCGCGGCGCGCTGGAATATTTTGCCCGGCACCGCAAGACCCTCGCGGCGCCGGTGACCCGAGAGGAGA AAGACGCATGA
Upstream 100 bases:
>100_bases GTGTCGCGTTCGCCATCCTGCTCATGAACCTGTGCGTGCCGCTGATCGATCAGTACACCCAGCCGCGCGTCTACGGTGAA GTCCGCAAGGAGCCGCGCGC
Downstream 100 bases:
>100_bases TGACCCTGAGCGAATTCCGCAGCCTCTTCCACAACGGCCTCGTCAAGCAGAACACGGGACTCGTGCAACTGCTCGGCCTG TGCCCGCTGCTCGCGATCAG
Product: RnfABCDGE type electron transport complex subunit G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSMSGAARNALRAGTVLVVFAVVGTAMLAFTHGRTEPVIARSRQAEQLAFIEQVLPSRLYDNDLLASERRVPRDAMLGTR RPSAVWVARRGDAFAGVVLEAVAPDGYSGDIGLLVGIDAAGTVTGVRVTGHRETPGLGDYIDRAKSPWIEQFTGKSLDNP PPRAWRVAKDGGTFDTRAGATITPRAVVKAVRGALEYFARHRKTLAAPVTREEKDA
Sequences:
>Translated_216_residues MSMSGAARNALRAGTVLVVFAVVGTAMLAFTHGRTEPVIARSRQAEQLAFIEQVLPSRLYDNDLLASERRVPRDAMLGTR RPSAVWVARRGDAFAGVVLEAVAPDGYSGDIGLLVGIDAAGTVTGVRVTGHRETPGLGDYIDRAKSPWIEQFTGKSLDNP PPRAWRVAKDGGTFDTRAGATITPRAVVKAVRGALEYFARHRKTLAAPVTREEKDA >Mature_215_residues SMSGAARNALRAGTVLVVFAVVGTAMLAFTHGRTEPVIARSRQAEQLAFIEQVLPSRLYDNDLLASERRVPRDAMLGTRR PSAVWVARRGDAFAGVVLEAVAPDGYSGDIGLLVGIDAAGTVTGVRVTGHRETPGLGDYIDRAKSPWIEQFTGKSLDNPP PRAWRVAKDGGTFDTRAGATITPRAVVKAVRGALEYFARHRKTLAAPVTREEKDA
Specific function: May be part of a membrane complex involved in electron transport [H]
COG id: COG4659
COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rnfG family [H]
Homologues:
Organism=Escherichia coli, GI1787918, Length=187, Percent_Identity=45.9893048128342, Blast_Score=143, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022989 - InterPro: IPR010209 - InterPro: IPR007329 [H]
Pfam domain/function: PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 23179; Mature: 23048
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSGAARNALRAGTVLVVFAVVGTAMLAFTHGRTEPVIARSRQAEQLAFIEQVLPSRLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DNDLLASERRVPRDAMLGTRRPSAVWVARRGDAFAGVVLEAVAPDGYSGDIGLLVGIDAA CCHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCC GTVTGVRVTGHRETPGLGDYIDRAKSPWIEQFTGKSLDNPPPRAWRVAKDGGTFDTRAGA CCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC TITPRAVVKAVRGALEYFARHRKTLAAPVTREEKDA EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SMSGAARNALRAGTVLVVFAVVGTAMLAFTHGRTEPVIARSRQAEQLAFIEQVLPSRLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC DNDLLASERRVPRDAMLGTRRPSAVWVARRGDAFAGVVLEAVAPDGYSGDIGLLVGIDAA CCHHHHHHHCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCC GTVTGVRVTGHRETPGLGDYIDRAKSPWIEQFTGKSLDNPPPRAWRVAKDGGTFDTRAGA CCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCC TITPRAVVKAVRGALEYFARHRKTLAAPVTREEKDA EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA