| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ilvI [H]
Identifier: 74318009
GI number: 74318009
Start: 2081145
End: 2082986
Strand: Reverse
Name: ilvI [H]
Synonym: Tbd_1991
Alternate gene names: 74318009
Gene position: 2082986-2081145 (Counterclockwise)
Preceding gene: 74318010
Following gene: 74318008
Centisome position: 71.58
GC content: 62.43
Gene sequence:
>1842_bases TTGCCGTCGCCAGCATTTTTTTCCATTCCCACAGCTGGAAACGCGCCACGCGAAGGCGTTTTCTTGACCGAAACGCGGCA AAACGATTACCCTCACGGGTTCACCAACGAATTGATTTTTTGCCAGTTTATGGAAGCCACGGGCGCCGAGATCGTCGTAC GTTGTCTGGCTGAAGAGGGGGTCGAGTTCGTCTTCGGCTATCCCGGCGGAGCCGTGCTCAACATCTACGACGAGATCTTC AAGCAGAACAGGTTCAAGCACGTGCTGGTGCGCCACGAACAGGCGGCCGTCCACGCTGCCGACGCCTATGCGCGCTCGAC CGGCCGCGTCGGCGTGGCGCTCGTCACCTCGGGGCCCGGCGTCACCAACGCTGTGACCGGCATCGCCACGGCGTATATGG ATTCGGTGCCGATCGTCGTCGTCACCGGCCAGGTGCCGACGCCCGCGATCGGGCTCGACGCCTTCCAGGAAGTCGACACC GTCGGCATCACACGGCCCTGCGTCAAACACAATTTCCTCGTCAAGGACGTCAAGGATCTGGCCGCGACGATGAAGAAGGC CTTCATCATCGCAGCCACCGGTCGCCCCGGCCCGGTGGTCGTCGACGTACCCAAGGACGTGACCTACCACGTGACCGAGT TCGAATATCCGGCCACGGTCGAGATGCGTTCGTACAACCCCGTTGTCAAAGGCCACAGCGGTCAGTTGAAGCGCGCCGTG CAGATGCTGCTCGAAGCCAAGCGCCCGATGATCTACGCGGGCGGCGGCGTCGTCCTCGGCGACGCGTCGGCGCAGCTGAC CGAACTCGCGCGCCTGCTCGGCTTTCCCTGCACCAATACGCTGATGGGTCTCGGCGGTTATCCTGCGACCGACAGGCAGA ACCTCGGCATGCTCGGCATGCACGGCACCTATGAAGCGAACATGGCGATGCAGCACTGCGACGTGCTGCTGGCCGTCGGC GCGCGCTTCGACGACCGCGTGATCGGCAACCCCGCGCACTTCGCCAAGGAGCAGCGTCGCATCATCCACATCGACATCGA CCCGTCTTCGATCTCGAAGCGCGTCAAGGTCGACGTGCCCATCGTCGGCGACGTCAGGAACGTGCTGCGCGACATGCTGA GCCTGCTGAAGCAGGCCAAGGAAGTGCCCGACGCTGCGGCGCTCAACGCGTGGTGGACGCAGATCGAATTGTGGCGCTCG AAGAACTGCCTCAAGTACAACCGCAACAGCCCGATCATCAAGCCGCAGTATGTGGTCGAAAAGCTGTGGGAAGTCACCAA GGGCGACGCCTTCATCACCTCCGACGTCGGCCAGCACCAGATGTGGGCGGCCCAGTACTACAAGTTCGACAAGCCGCGCC GCTGGATCAATTCCGGTGGCCTCGGCACCATGGGCGTCGGCCTGCCGTATGCAATGGGCGTGCAACTCGCGCATCCGGAG GCGCAGGTCGCCTGCATCACCGGCGAGTCGTCGATCCAGATGAACATCCAGGAGCTTTCGACCTGCAAGCAGTACCGCAT TCCGGTCAAGGTCGTCACGCTCAATAACCGCTACATGGGCATGGTGAGGCAGTGGCAGGAGTTCTTCTACGGCAGCCGCT ACGCCGAGTCGTACATGGAGTCGCTGCCCGACTTCGTCAAGCTCGCCGAAGCCTACGGCCACGTCGGCATGCGCATCGAC AAGCCCGAGGACGTCGAAGCGGCGCTCAAGGAAGCCTTCTCGCCTGTACTCAAGGAAAGAATGGTGTTCATGGACTTCCA GACCGACCAGACCGAGAACGTCTTCCCGATGGTCGAAGGCGGCAAGGGCCTGTCGGAAATGATTCTGGCGGAGGAGCTGT GA
Upstream 100 bases:
>100_bases AACGCCGACGCGTCGTTGAACCAGATCATGCAGGCGCTGGCCGAAGCGGCCCACGAGTAGCCGCCTGCGTCCCCGGCAAA AAGCCCGCCGACCGGGTCTT
Downstream 100 bases:
>100_bases TGAGCACCCGCCATATCATTTCGCTCTTGATGGAGAACGAGGCGGGTGCGCTGTCGCGCGTCGCCGGTCTCTTCTCCGCG CGCGCCTACAACATCGAATC
Product: acetolactate synthase, large subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MPSPAFFSIPTAGNAPREGVFLTETRQNDYPHGFTNELIFCQFMEATGAEIVVRCLAEEGVEFVFGYPGGAVLNIYDEIF KQNRFKHVLVRHEQAAVHAADAYARSTGRVGVALVTSGPGVTNAVTGIATAYMDSVPIVVVTGQVPTPAIGLDAFQEVDT VGITRPCVKHNFLVKDVKDLAATMKKAFIIAATGRPGPVVVDVPKDVTYHVTEFEYPATVEMRSYNPVVKGHSGQLKRAV QMLLEAKRPMIYAGGGVVLGDASAQLTELARLLGFPCTNTLMGLGGYPATDRQNLGMLGMHGTYEANMAMQHCDVLLAVG ARFDDRVIGNPAHFAKEQRRIIHIDIDPSSISKRVKVDVPIVGDVRNVLRDMLSLLKQAKEVPDAAALNAWWTQIELWRS KNCLKYNRNSPIIKPQYVVEKLWEVTKGDAFITSDVGQHQMWAAQYYKFDKPRRWINSGGLGTMGVGLPYAMGVQLAHPE AQVACITGESSIQMNIQELSTCKQYRIPVKVVTLNNRYMGMVRQWQEFFYGSRYAESYMESLPDFVKLAEAYGHVGMRID KPEDVEAALKEAFSPVLKERMVFMDFQTDQTENVFPMVEGGKGLSEMILAEEL
Sequences:
>Translated_613_residues MPSPAFFSIPTAGNAPREGVFLTETRQNDYPHGFTNELIFCQFMEATGAEIVVRCLAEEGVEFVFGYPGGAVLNIYDEIF KQNRFKHVLVRHEQAAVHAADAYARSTGRVGVALVTSGPGVTNAVTGIATAYMDSVPIVVVTGQVPTPAIGLDAFQEVDT VGITRPCVKHNFLVKDVKDLAATMKKAFIIAATGRPGPVVVDVPKDVTYHVTEFEYPATVEMRSYNPVVKGHSGQLKRAV QMLLEAKRPMIYAGGGVVLGDASAQLTELARLLGFPCTNTLMGLGGYPATDRQNLGMLGMHGTYEANMAMQHCDVLLAVG ARFDDRVIGNPAHFAKEQRRIIHIDIDPSSISKRVKVDVPIVGDVRNVLRDMLSLLKQAKEVPDAAALNAWWTQIELWRS KNCLKYNRNSPIIKPQYVVEKLWEVTKGDAFITSDVGQHQMWAAQYYKFDKPRRWINSGGLGTMGVGLPYAMGVQLAHPE AQVACITGESSIQMNIQELSTCKQYRIPVKVVTLNNRYMGMVRQWQEFFYGSRYAESYMESLPDFVKLAEAYGHVGMRID KPEDVEAALKEAFSPVLKERMVFMDFQTDQTENVFPMVEGGKGLSEMILAEEL >Mature_612_residues PSPAFFSIPTAGNAPREGVFLTETRQNDYPHGFTNELIFCQFMEATGAEIVVRCLAEEGVEFVFGYPGGAVLNIYDEIFK QNRFKHVLVRHEQAAVHAADAYARSTGRVGVALVTSGPGVTNAVTGIATAYMDSVPIVVVTGQVPTPAIGLDAFQEVDTV GITRPCVKHNFLVKDVKDLAATMKKAFIIAATGRPGPVVVDVPKDVTYHVTEFEYPATVEMRSYNPVVKGHSGQLKRAVQ MLLEAKRPMIYAGGGVVLGDASAQLTELARLLGFPCTNTLMGLGGYPATDRQNLGMLGMHGTYEANMAMQHCDVLLAVGA RFDDRVIGNPAHFAKEQRRIIHIDIDPSSISKRVKVDVPIVGDVRNVLRDMLSLLKQAKEVPDAAALNAWWTQIELWRSK NCLKYNRNSPIIKPQYVVEKLWEVTKGDAFITSDVGQHQMWAAQYYKFDKPRRWINSGGLGTMGVGLPYAMGVQLAHPEA QVACITGESSIQMNIQELSTCKQYRIPVKVVTLNNRYMGMVRQWQEFFYGSRYAESYMESLPDFVKLAEAYGHVGMRIDK PEDVEAALKEAFSPVLKERMVFMDFQTDQTENVFPMVEGGKGLSEMILAEEL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=561, Percent_Identity=26.9162210338681, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI93004078, Length=558, Percent_Identity=25.2688172043011, Blast_Score=162, Evalue=7e-40, Organism=Escherichia coli, GI87081685, Length=567, Percent_Identity=59.6119929453263, Blast_Score=711, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=566, Percent_Identity=39.9293286219081, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1786717, Length=540, Percent_Identity=33.1481481481482, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI1787096, Length=545, Percent_Identity=28.256880733945, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1788716, Length=485, Percent_Identity=25.360824742268, Blast_Score=146, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17542570, Length=578, Percent_Identity=25.4325259515571, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17531299, Length=543, Percent_Identity=26.3351749539595, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17531301, Length=543, Percent_Identity=26.3351749539595, Blast_Score=148, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6323755, Length=589, Percent_Identity=43.6332767402377, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6320816, Length=501, Percent_Identity=25.748502994012, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6323163, Length=498, Percent_Identity=23.6947791164659, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321524, Length=501, Percent_Identity=22.9540918163673, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323073, Length=499, Percent_Identity=24.0480961923848, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922626, Length=487, Percent_Identity=27.3100616016427, Blast_Score=166, Evalue=4e-41,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 67805; Mature: 67674
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPAFFSIPTAGNAPREGVFLTETRQNDYPHGFTNELIFCQFMEATGAEIVVRCLAEEG CCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHCC VEFVFGYPGGAVLNIYDEIFKQNRFKHVLVRHEQAAVHAADAYARSTGRVGVALVTSGPG CEEEEECCCCHHHHHHHHHHHCCCCHHHHEECHHHHHHHHHHHHHCCCCEEEEEEECCCC VTNAVTGIATAYMDSVPIVVVTGQVPTPAIGLDAFQEVDTVGITRPCVKHNFLVKDVKDL CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHH AATMKKAFIIAATGRPGPVVVDVPKDVTYHVTEFEYPATVEMRSYNPVVKGHSGQLKRAV HHHHHCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCEEECCCHHHHHHH QMLLEAKRPMIYAGGGVVLGDASAQLTELARLLGFPCTNTLMGLGGYPATDRQNLGMLGM HHHHHCCCCEEEECCEEEEECCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEC HGTYEANMAMQHCDVLLAVGARFDDRVIGNPAHFAKEQRRIIHIDIDPSSISKRVKVDVP CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECHHHHCCEEEEECC IVGDVRNVLRDMLSLLKQAKEVPDAAALNAWWTQIELWRSKNCLKYNRNSPIIKPQYVVE EEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHH KLWEVTKGDAFITSDVGQHQMWAAQYYKFDKPRRWINSGGLGTMGVGLPYAMGVQLAHPE HHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCHHHHCCCCCCEECCCCHHHHCEEEECCC AQVACITGESSIQMNIQELSTCKQYRIPVKVVTLNNRYMGMVRQWQEFFYGSRYAESYME CEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHH SLPDFVKLAEAYGHVGMRIDKPEDVEAALKEAFSPVLKERMVFMDFQTDQTENVFPMVEG HHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEC GKGLSEMILAEEL CCCHHHHHHHHCC >Mature Secondary Structure PSPAFFSIPTAGNAPREGVFLTETRQNDYPHGFTNELIFCQFMEATGAEIVVRCLAEEG CCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHCC VEFVFGYPGGAVLNIYDEIFKQNRFKHVLVRHEQAAVHAADAYARSTGRVGVALVTSGPG CEEEEECCCCHHHHHHHHHHHCCCCHHHHEECHHHHHHHHHHHHHCCCCEEEEEEECCCC VTNAVTGIATAYMDSVPIVVVTGQVPTPAIGLDAFQEVDTVGITRPCVKHNFLVKDVKDL CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHH AATMKKAFIIAATGRPGPVVVDVPKDVTYHVTEFEYPATVEMRSYNPVVKGHSGQLKRAV HHHHHCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCEEEEECCCCEEECCCHHHHHHH QMLLEAKRPMIYAGGGVVLGDASAQLTELARLLGFPCTNTLMGLGGYPATDRQNLGMLGM HHHHHCCCCEEEECCEEEEECCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEC HGTYEANMAMQHCDVLLAVGARFDDRVIGNPAHFAKEQRRIIHIDIDPSSISKRVKVDVP CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECHHHHCCEEEEECC IVGDVRNVLRDMLSLLKQAKEVPDAAALNAWWTQIELWRSKNCLKYNRNSPIIKPQYVVE EEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHH KLWEVTKGDAFITSDVGQHQMWAAQYYKFDKPRRWINSGGLGTMGVGLPYAMGVQLAHPE HHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCHHHHCCCCCCEECCCCHHHHCEEEECCC AQVACITGESSIQMNIQELSTCKQYRIPVKVVTLNNRYMGMVRQWQEFFYGSRYAESYME CEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHH SLPDFVKLAEAYGHVGMRIDKPEDVEAALKEAFSPVLKERMVFMDFQTDQTENVFPMVEG HHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEC GKGLSEMILAEEL CCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]