Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317976

Identifier: 74317976

GI number: 74317976

Start: 2052544

End: 2053458

Strand: Direct

Name: 74317976

Synonym: Tbd_1958

Alternate gene names: NA

Gene position: 2052544-2053458 (Clockwise)

Preceding gene: 74317974

Following gene: 74317988

Centisome position: 70.54

GC content: 57.49

Gene sequence:

>915_bases
ATGAATAAATTTATAGAGATCCTGGGCGGCGGGGTTCTTGCGCTGTCCTCGGTGTGCGCCCACGCGGAAATATCCTATTT
TCCCGACGCGGTTTTCGATAGCGAAAGCGGTTTGTATTGGCGCCTTTTTGAAACACTTGAGCAAGGGGAGGCGGCCGGCT
TTAGCTGGGCTTCGGTGGATCAGACGGCGGATTTATTTCTTCATTACGCGCCGCCCGACGCCAATGGCACGCTTCCGGGT
TATGACCCGGACTGGGGTGGCATTCTCAGTTACACGACAAGCGGGGACGGGATGTCCTACTCGTTTACCTGGGAGTCGAG
CTACGATTACGACAACTATCTGCCACCCCTACTTTCGGATCCACTCGGATATAGCATTTCTTACGGAACTCCTGGACCGC
ACTCTCCCATGACCGACGCCTTGCTAGCTCAGGTATCGGGCGACAACCAAGAAGCTGTTACTGTGCTTCTCCGGGACGTC
ACACAAGCCGATCAATACGGTTGGATCGCTGGAGAGGTCGAAGGAATCATCGACCCGCCCTCGCAAAGCATCGACGATTG
CCCTTGTCCTTTTTACGATGAGCGCACCGCCGCGATTACGATGGTCGACTATTACAACGACGATGGCTCTCTCAATATCG
CCGGGTACCTGATGGTCAGCAGTGTGCCTGAGCCCACTCCCCCCGCCCTCTTTCTTGCGGGAATCGCTGGCATAGCGTTG
CGTCGCAAACTCACACAGGTCTGCGCCCCCCGACTGGGCCGTGGTAAGGGATGCGGTCACGCACGCCATGCGTGCCGCAC
CGCAGGCTTTCGCCTCGGCAATGCCAGAGCCGATCTCGAAGTTCGCCTGGACGCGAGCCGGTCTGAAACCCGACTCAGCG
GATCGGAATGGTCACGAACATCGCGGTCGTATTGA

Upstream 100 bases:

>100_bases
CTTGCCTCCCCGGCAGAGAGAGGATTTAGCGGCGCCAGGGGCCTACCGTCAATCAACCCGACACATTTCACCGACTTGGC
TTCTTAACAAAGGAGGGGGT

Downstream 100 bases:

>100_bases
CCGAGTTGAAGTCGCTCACCTTGGGGAAATGGGTGAAATTCACCGTCACGTGGTCGAAGCGCACCGCAAGCAGCGGGATC
GGCGCGATGAAGGCGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVDQTADLFLHYAPPDANGTLPG
YDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSDPLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDV
TQADQYGWIAGEVEGIIDPPSQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL
RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRTSRSY

Sequences:

>Translated_304_residues
MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVDQTADLFLHYAPPDANGTLPG
YDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSDPLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDV
TQADQYGWIAGEVEGIIDPPSQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL
RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRTSRSY
>Mature_304_residues
MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVDQTADLFLHYAPPDANGTLPG
YDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSDPLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDV
TQADQYGWIAGEVEGIIDPPSQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL
RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRTSRSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32935; Mature: 32935

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVD
CCHHHHHHCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCC
QTADLFLHYAPPDANGTLPGYDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSD
CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHCC
PLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDVTQADQYGWIAGEVEGIIDPP
CCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCC
SQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH
RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEECCCCCCEEEEEECCCCHHHCCCCHHCHH
SRSY
CCCC
>Mature Secondary Structure
MNKFIEILGGGVLALSSVCAHAEISYFPDAVFDSESGLYWRLFETLEQGEAAGFSWASVD
CCHHHHHHCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCC
QTADLFLHYAPPDANGTLPGYDPDWGGILSYTTSGDGMSYSFTWESSYDYDNYLPPLLSD
CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHCC
PLGYSISYGTPGPHSPMTDALLAQVSGDNQEAVTVLLRDVTQADQYGWIAGEVEGIIDPP
CCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEECCC
SQSIDDCPCPFYDERTAAITMVDYYNDDGSLNIAGYLMVSSVPEPTPPALFLAGIAGIAL
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHH
RRKLTQVCAPRLGRGKGCGHARHACRTAGFRLGNARADLEVRLDASRSETRLSGSEWSRT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEECCCCCCEEEEEECCCCHHHCCCCHHCHH
SRSY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA