Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317924

Identifier: 74317924

GI number: 74317924

Start: 2002125

End: 2002802

Strand: Reverse

Name: 74317924

Synonym: Tbd_1906

Alternate gene names: NA

Gene position: 2002802-2002125 (Counterclockwise)

Preceding gene: 74317925

Following gene: 74317920

Centisome position: 68.83

GC content: 70.21

Gene sequence:

>678_bases
GTGAGGCGCTGGCTCGCTCTGCTCTGTCTTGCCGCGACGGGTACGCTTCACGCGAGCGAGCCGACGGACGCGGGGGCGAC
GATGACCGCGCTGCGCTACGTCGACCAGGACCCGGGCGATCCGGCCTACGCGACGCGCATCCTCGTGACGCCGGACTTTC
TGCGCATGGACACCGGCGAGGACGACGGCGATTTCGTCCTGCTCGATCGGCGCCAGCGCCAGGTGACCAACGTGATGCGC
GATAGCGGTCTCGCCATGGTGTTCAGCGGGAAAGGCGCGCCACCCCGGCCGGCGACGTGGAAATCGGATCTGCGCACCGT
GCCTGCCGCCGCCGGCACCCGGCGTTTCAGCCTCGTCGTAGAGGGCGTCGTCTGCAGCGAGGGGATCGTCGCGTCGCGAG
CCGCGCCCGACGCGGCGCGGGCGATGGCCGAACTGAAGACGGTGCTGGCGGCGACCCAGTATCGGGTGTGGAAGGATTCT
CCGCCCGAGATGCAGCACGACTGCGACCTGGCGAACGAGGTGTGGGAGGCGGATGCGCTCCTCGGCCTTGGCCTGCCGCT
GGAGGTGCGCGAGTTCAGCGGGCGCACGCGGCGATTCGAAAGCGAATCGAAGCTGCCCCGCGCGCCGGAACTGTTCCGCG
TCCCGCCGGGCTTGACGGCGGTCAACGCGCCGTCATAA

Upstream 100 bases:

>100_bases
AGCAGCGGCTGGCGGCCGGGATCGGCGACGGTCTTGTACGCATCGCAGTGGGTCTCGAGTCGGTCGCGGACATCGAAGCC
GATCTGGCGCGAGGGCTGGC

Downstream 100 bases:

>100_bases
GTCCTCGACCCGCAGCGTGCATCTGGCCGCGTCGCAGACGACGTAGCCCCAGCGCGCGTACCAGTCGGGAAGCACCCAGC
GCTCGCACTGCTGGCCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRRWLALLCLAATGTLHASEPTDAGATMTALRYVDQDPGDPAYATRILVTPDFLRMDTGEDDGDFVLLDRRQRQVTNVMR
DSGLAMVFSGKGAPPRPATWKSDLRTVPAAAGTRRFSLVVEGVVCSEGIVASRAAPDAARAMAELKTVLAATQYRVWKDS
PPEMQHDCDLANEVWEADALLGLGLPLEVREFSGRTRRFESESKLPRAPELFRVPPGLTAVNAPS

Sequences:

>Translated_225_residues
MRRWLALLCLAATGTLHASEPTDAGATMTALRYVDQDPGDPAYATRILVTPDFLRMDTGEDDGDFVLLDRRQRQVTNVMR
DSGLAMVFSGKGAPPRPATWKSDLRTVPAAAGTRRFSLVVEGVVCSEGIVASRAAPDAARAMAELKTVLAATQYRVWKDS
PPEMQHDCDLANEVWEADALLGLGLPLEVREFSGRTRRFESESKLPRAPELFRVPPGLTAVNAPS
>Mature_225_residues
MRRWLALLCLAATGTLHASEPTDAGATMTALRYVDQDPGDPAYATRILVTPDFLRMDTGEDDGDFVLLDRRQRQVTNVMR
DSGLAMVFSGKGAPPRPATWKSDLRTVPAAAGTRRFSLVVEGVVCSEGIVASRAAPDAARAMAELKTVLAATQYRVWKDS
PPEMQHDCDLANEVWEADALLGLGLPLEVREFSGRTRRFESESKLPRAPELFRVPPGLTAVNAPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24508; Mature: 24508

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWLALLCLAATGTLHASEPTDAGATMTALRYVDQDPGDPAYATRILVTPDFLRMDTGE
CHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCCEEECCCC
DDGDFVLLDRRQRQVTNVMRDSGLAMVFSGKGAPPRPATWKSDLRTVPAAAGTRRFSLVV
CCCCEEEECCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEEE
EGVVCSEGIVASRAAPDAARAMAELKTVLAATQYRVWKDSPPEMQHDCDLANEVWEADAL
EEEHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHH
LGLGLPLEVREFSGRTRRFESESKLPRAPELFRVPPGLTAVNAPS
HHCCCCEEHHHHCCCHHCCCCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MRRWLALLCLAATGTLHASEPTDAGATMTALRYVDQDPGDPAYATRILVTPDFLRMDTGE
CHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHEEEEEECCCCEEECCCC
DDGDFVLLDRRQRQVTNVMRDSGLAMVFSGKGAPPRPATWKSDLRTVPAAAGTRRFSLVV
CCCCEEEECCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEEEEEEE
EGVVCSEGIVASRAAPDAARAMAELKTVLAATQYRVWKDSPPEMQHDCDLANEVWEADAL
EEEHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHH
LGLGLPLEVREFSGRTRRFESESKLPRAPELFRVPPGLTAVNAPS
HHCCCCEEHHHHCCCHHCCCCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA