Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is wcaE [C]

Identifier: 74317892

GI number: 74317892

Start: 1970800

End: 1971549

Strand: Reverse

Name: wcaE [C]

Synonym: Tbd_1874

Alternate gene names: 74317892

Gene position: 1971549-1970800 (Counterclockwise)

Preceding gene: 74317893

Following gene: 74317891

Centisome position: 67.76

GC content: 60.27

Gene sequence:

>750_bases
ATGAAAATCAGCACCATCACGGTGGCCTTTAACGCGGCGGGTACGATTGCCGATACGCTAAAATCCGTCGCCGCTCAGAC
GCTTTCGGACGTCGAACACATCGTGGTGGACGGCGCGTCGACGGACGGGACGTTGGACGTCATTTGTCGCCACGCAGGGC
GTGTCGCGCGTGTGATATCGGAGCCGGACGCGGGCATTTACGATGCGATGAACAAGGGGCTGCGTCTCGCGACAGGAGAT
GTCGTCGGTTTTCTCAATGCCGACGATGTGTATGCGGATGCGGGAGTGCTCGCGCGGGTGTCAGCGATCATGGACACGGA
AAAGCTCGACGCGCTGTTCGGGGATGCCGAGTTTGTCAATTCAAGCCGGCCCGACCGTCCGACGCGGCGTTACCGCTCGG
ACCGGTTTCGCCCCGAACGCATCGCGTGGGGATGGATGCCGGCACATCCGGCACTTTTTCTGCGACGCGAGCTGTATGAA
CGATTCGGAATATTCAGGACCGATTACCGTATCGCTGGCGACTTCGAACTGGTGGCGCGGATGTTTCACGGCGACACGTT
GTGGTATCGCCACGTACCGGAAGTGCTGGTCCGGATGCGGACTGGGGGAATCAGCACGGGCGGGTGGCGCAACACTCTTC
AGCTCAACCGCGAGGTGCTTCGCGCCTGCCGGGAGAATGGGATCCCGACCAATCTGCCAAAGATTCTTTCGAAATACCCG
GCCAAGCTGCTCGAGTTTCTGCATCGATGA

Upstream 100 bases:

>100_bases
CTAACGTGCCGCTCGGCACGCGGTTGCGCTGGCGCGTGGACATGGTGCGGCACTTGTTTACGCGCCGTCCCCGGTCAATT
GTGACGGAGCGGTCAGACGC

Downstream 100 bases:

>100_bases
GGATTCTCGCTTCAGGCGCCGCCGGCTTTGTGGGACGCGCACTGTGCAGCCAGCTCTCCCGGCGCGGGCACGTCACGATA
CCTGCCGTACGCCGAGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKISTITVAFNAAGTIADTLKSVAAQTLSDVEHIVVDGASTDGTLDVICRHAGRVARVISEPDAGIYDAMNKGLRLATGD
VVGFLNADDVYADAGVLARVSAIMDTEKLDALFGDAEFVNSSRPDRPTRRYRSDRFRPERIAWGWMPAHPALFLRRELYE
RFGIFRTDYRIAGDFELVARMFHGDTLWYRHVPEVLVRMRTGGISTGGWRNTLQLNREVLRACRENGIPTNLPKILSKYP
AKLLEFLHR

Sequences:

>Translated_249_residues
MKISTITVAFNAAGTIADTLKSVAAQTLSDVEHIVVDGASTDGTLDVICRHAGRVARVISEPDAGIYDAMNKGLRLATGD
VVGFLNADDVYADAGVLARVSAIMDTEKLDALFGDAEFVNSSRPDRPTRRYRSDRFRPERIAWGWMPAHPALFLRRELYE
RFGIFRTDYRIAGDFELVARMFHGDTLWYRHVPEVLVRMRTGGISTGGWRNTLQLNREVLRACRENGIPTNLPKILSKYP
AKLLEFLHR
>Mature_249_residues
MKISTITVAFNAAGTIADTLKSVAAQTLSDVEHIVVDGASTDGTLDVICRHAGRVARVISEPDAGIYDAMNKGLRLATGD
VVGFLNADDVYADAGVLARVSAIMDTEKLDALFGDAEFVNSSRPDRPTRRYRSDRFRPERIAWGWMPAHPALFLRRELYE
RFGIFRTDYRIAGDFELVARMFHGDTLWYRHVPEVLVRMRTGGISTGGWRNTLQLNREVLRACRENGIPTNLPKILSKYP
AKLLEFLHR

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788368, Length=236, Percent_Identity=29.6610169491525, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27909; Mature: 27909

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTITVAFNAAGTIADTLKSVAAQTLSDVEHIVVDGASTDGTLDVICRHAGRVARVIS
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHC
EPDAGIYDAMNKGLRLATGDVVGFLNADDVYADAGVLARVSAIMDTEKLDALFGDAEFVN
CCCCCHHHHHCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
SSRPDRPTRRYRSDRFRPERIAWGWMPAHPALFLRRELYERFGIFRTDYRIAGDFELVAR
CCCCCCHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHHHCCEECCEEECCCHHHHHH
MFHGDTLWYRHVPEVLVRMRTGGISTGGWRNTLQLNREVLRACRENGIPTNLPKILSKYP
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AKLLEFLHR
HHHHHHHCC
>Mature Secondary Structure
MKISTITVAFNAAGTIADTLKSVAAQTLSDVEHIVVDGASTDGTLDVICRHAGRVARVIS
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHC
EPDAGIYDAMNKGLRLATGDVVGFLNADDVYADAGVLARVSAIMDTEKLDALFGDAEFVN
CCCCCHHHHHCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
SSRPDRPTRRYRSDRFRPERIAWGWMPAHPALFLRRELYERFGIFRTDYRIAGDFELVAR
CCCCCCHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHHHCCEECCEEECCCHHHHHH
MFHGDTLWYRHVPEVLVRMRTGGISTGGWRNTLQLNREVLRACRENGIPTNLPKILSKYP
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AKLLEFLHR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]