| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317886
Identifier: 74317886
GI number: 74317886
Start: 1963808
End: 1964938
Strand: Direct
Name: 74317886
Synonym: Tbd_1868
Alternate gene names: NA
Gene position: 1963808-1964938 (Clockwise)
Preceding gene: 74317885
Following gene: 74317907
Centisome position: 67.49
GC content: 66.67
Gene sequence:
>1131_bases ATGTCTGAAGAAAAAAAACTGACCGTACTGCAACTGCTTCCCGCGCTCGAATCCGGGGGCGTCGAGCGCGGGACCGTCGA AATCGCGCAGGCGCTGGTCGAACACGGCCACCGCGCGCTCGTCATGTCCGCCGGTGGGCGCCTCGTCGCCCCGCTGACGC AGGCGGGTGCTCTGCATTTCACCTGGCCGATCGGCGTCAAGTCGGTGCGAACGCTCGCGCTCGTCTCGCGCCTGAGAAAA TTCCTGAGCGAACAAAAGGTCGACGTCGTCCACGCGCGCTCGCGCGTCCCGGCCTGGATCGCTTGGCTCGCCTGGCGCCG CATGGACCCGTCGACGCGGCCGCGCTTCGTCACGACCGTACACGGTCTCTACGGCGTCAACCGCTACAGCGCGATCATGG CGCGCGGCGAGCGCGTGATCGCAGTCTCCAACACGGTGCGCGACTACATCCTGCGCGAATATCCCAAGACCCTGCCGTGG CGCGTCGACGTCATCCACCGCGGCGTCGACGGCGCGCTCTATCCCCATGGCTGGAAACCCGATGCCGGCTGGCACGCTGC ATTCTTCGGTCAGTTCCCGAATGCGGCGGGCAAGCTGCTGCTCACCCTGCCCGGTCGCATCACGCGCCTCAAGGGACATG AGTCCTTCATCGAACTCGTCGCCCGGCTGAAGCGCCGCGGACTGCCCGTGCATGGCCTGATCGTCGGCGGCGCGGCAGCG TCCAAGCAGCGTTATTTGCAGAAGTTGCGCTACCGCGTGCGCAGCATGGGGCTCGAAGCCGACATCAGTTTCACGGGCCA GCGCGACGACCTGAAAAACATCCTTGCTATGTCGAACCTCGTGCTCTCTCTGTCGACCCAGCCCGAATCCTTCGGCCGCA CGACGCTCGAAGCGCTGCGGCTCGGCGTGCCGACCGCGGGCTTCGATCACGGCGGCGTAGGGGAAATCCTGCGTACGGTC TATCCGGCCGGCTTGCTGCCGATGGACCGCATCGACGAGGCCTGCCAGCGCATCGCGCACCTGCTGCAGGAGCCCGACGC GGTGCCTGAGGGCGACTTCTTTCCGTTGAAGGCGATGATCGAGCGCACGCTCGCGCTCTACGAACAGCTCGCGCGGGCGC CGCGGCGTTAG
Upstream 100 bases:
>100_bases TTACCCCGCGTTGCGCCGCAAAACGAACCCGCCGCTGGCCGAGGCCGACCGGTGCGCCGCCTGGATACTCGACTGGCTCG GCGCCAAGCACTAGGAACCC
Downstream 100 bases:
>100_bases CTTCGCCCGCGCAGCGCCGCGGGCAGATGCAGCAACCGCCCGCGCAGCTTGCCGTACAGGTCGCGCAAGGCGACGACCGG GCTCGACAGCCGCAACGCCC
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Lipopolysaccharide Core Biosynthesis Glycosyl Transferase; Glycosyltransferase Protein; Transferase; Phosphatidylinositol Alpha-Mannosyltransferase; N-Acetylgalactosamine Transferase; Group Glycosyltransferase; Lipopolysaccharide Biosynthesis Protein; BshA L-Malic Acid Glycosyltransferase; Alfa-Galactose Transferase
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHFTWPIGVKSVRTLALVSRLRK FLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTVHGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPW RVDVIHRGVDGALYPHGWKPDAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALRLGVPTAGFDHGGVGEILRTV YPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMIERTLALYEQLARAPRR
Sequences:
>Translated_376_residues MSEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHFTWPIGVKSVRTLALVSRLRK FLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTVHGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPW RVDVIHRGVDGALYPHGWKPDAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALRLGVPTAGFDHGGVGEILRTV YPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMIERTLALYEQLARAPRR >Mature_375_residues SEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHFTWPIGVKSVRTLALVSRLRKF LSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTVHGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPWR VDVIHRGVDGALYPHGWKPDAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAAS KQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALRLGVPTAGFDHGGVGEILRTVY PAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMIERTLALYEQLARAPRR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41813; Mature: 41682
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHF CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECHHCCCCEEE TWPIGVKSVRTLALVSRLRKFLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTV EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEH HGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPWRVDVIHRGVDGALYPHGWKP HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCC DAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA CCCCCHHHHCCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHH SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALR HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH LGVPTAGFDHGGVGEILRTVYPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMI HCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH ERTLALYEQLARAPRR HHHHHHHHHHHHCCCC >Mature Secondary Structure SEEKKLTVLQLLPALESGGVERGTVEIAQALVEHGHRALVMSAGGRLVAPLTQAGALHF CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECHHCCCCEEE TWPIGVKSVRTLALVSRLRKFLSEQKVDVVHARSRVPAWIAWLAWRRMDPSTRPRFVTTV EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEH HGLYGVNRYSAIMARGERVIAVSNTVRDYILREYPKTLPWRVDVIHRGVDGALYPHGWKP HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCC DAGWHAAFFGQFPNAAGKLLLTLPGRITRLKGHESFIELVARLKRRGLPVHGLIVGGAAA CCCCCHHHHCCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHH SKQRYLQKLRYRVRSMGLEADISFTGQRDDLKNILAMSNLVLSLSTQPESFGRTTLEALR HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHH LGVPTAGFDHGGVGEILRTVYPAGLLPMDRIDEACQRIAHLLQEPDAVPEGDFFPLKAMI HCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH ERTLALYEQLARAPRR HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA