Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317879

Identifier: 74317879

GI number: 74317879

Start: 1955614

End: 1958256

Strand: Reverse

Name: 74317879

Synonym: Tbd_1861

Alternate gene names: NA

Gene position: 1958256-1955614 (Counterclockwise)

Preceding gene: 74317880

Following gene: 74317872

Centisome position: 67.3

GC content: 61.94

Gene sequence:

>2643_bases
ATGCCTCGCTTTCCTGGTCAAATTGGCACGCGGCATCAAGGCGGCTTCAGCCTGGTCGAGGCGCTGTTTTCCGCATTGAT
ACTGGCCGTCGCGCTGCTCGGACTGGCCGGGTTCCATGCGGCCGCCATGCAGGACGGCAGCCTCGTCAAGGCGCGCTCGA
TCGCGGCCAGCCTGGCTCAGGAGAAACTGGATGACCTGCGCGGTTTTACCCGCCTCGAAGACGACGCCACTACGACGGGC
GTGAACGAATGTGCCGACCCGACGTTCTGTTTCAGTGAAATCGCCAATAACGCCGGGGGACGCGAAAACAGCGGCAGTCT
GCTCCTTCCCTCGGGAACGGTCAGTGGTTACACCGACAGCTATTCGCTCGAATGGGCTGTGACCTGCGCGGCCGAAACGG
CCGGCAGCGCATTGAGTTTTAGCAGCACCTGCACGGACCCGACCGCAAAGCTGGCAACCGTGACCGTTTCCTGGACCGAC
AGCAAGGGCGGACCTCAGGAGGTCGAATTGCAGGGCGTGATCTATGCGATGGATCCGGCGCGTATGGCGATGGGGACGGC
CAGTGCCTTTTCGACGCAAAAACCCGTGGCAGGTTATACGCCTGTCGGGGTGCCGGACGCTGTTCCTGTTCCGATCAACA
CCGGGGGCTCCCAGTTCAAGGAATCGAGCAAGCCGCTGCCCGAAGTCTCCCAGAGCGGTGACGGGATCAACGTGAGCTTC
GACTCGGTCGTCTACTCGCGCGACGGCGCAGGCTACCAGAAGGATTCGCAGGAAGAATTCAGCAGCGTTACCTGCGAGTG
TCAGTTCAACAGCGGGACCGGCACAGGCTACACGCCCACGCGCAAGGTATGGAACGGCTCCCGACTGGTGAACCAGGCCG
GTGAAGCCGTCACCAAGAAAACAGGGCAGCCCCTCGGCAACAACCCGCCGTCCCAGTGCGACGTCTGCTGTCGTGACCAC
CACGACCGCGCCGCCAACGACCCGAAGTACGATCCGAAGCGGCCCACTTCCGACTACACGGGCAGCGAAGATCACAAACA
TTATTGGTATTCGAGCTGCGTCAGTGGCGGGGTGGGTGCGGCGAACTGCACCGACGCCAACAAGGATGCAAGCCTCGCTT
CGGGCTCGGCCTTCACCGAAGTCACCGACGGGGCTTACCTCGAGTCGTGCCGCGTCGGACGCGTCGACGGTTTCTGGCGC
GTGATGCAGGACTGGCAGCTGCGCAAGGTCACCATCCTTCCGTACAACTTCCTGCTGAATAATCAGACCAACCTGAACAA
TTACGTCGACGTCGTCGAGAAGGTTGTGGAAAACGCAGTGAAGACAGACTCCGGCGGCTCCGGCGTTACCGTGCCGACGC
TGGGTGGACGCGATCTGACACTTCCCTCAGGTTCCGATCCGGTGCAGCTACTGTCGCGGGCGGTCTACGTCGACACGATA
TACAACGCCGAAGACGATCCGGCGACCTCGAGCGTGAACGAGCAAAACACCGTCGACACGGCGTACTACTCAGCGTTGCT
TGCCAAGGTCACTGCCAGTCAGACCGCGTCGAACTCGGCGTGGCTGGAATTCGCGCCATTCTACGAAGCCAATCTCACGC
TGCTCTTCGACTGGATATCCTCGGACACCGGTGTCGCCACCGTGACCAGCGAAGCCATCAACGCGATTGTCGACCCCGTG
AACAGGTATTACGGCAGCTTCAGCCGTGGCAAGGTGACCGTGCAGAGCGGCACAACCGCGGGGACGTCGACGATTACGGC
CAAGGCCCGGCTTTCCAACAGCGGCGTGACGGGTGGCGTCAACGTTAACGTAAATCCCACCCCCCCAACTTATGTGCCCG
GCGTGAGCTACGGTACCGATGTATACGACAATCTGAGCAGCAATGTGCTGGCCGACACGATCACCGTGAGCCGTCCGGCC
GCGGGGACGGCACATTCCATCACGGGGAAGGTCGTGAAAGGGAATGGATCTGCCAACGTGGCCGAGACGGGCACCCCGGC
ATCGCCGATCACGGTGACGCTCAACACGACGTCGGGCTCGGTCATCAGCCCATGCAGTGCCCAGGTCGGCGACTCGGATG
TTTACGCGTGGTACTACTCGTGTACCGTCTCGAACGGCTGGACCGGCACCCTGACCGTCGGCAGTACGGGATCGGTATAC
ACGTTCGACGACGCTACCAGCAGATCGCTCTCCACTTCGTCCATGACAGTGGCTAATGCGACGACGGTCGGCCAGGTCAT
CGCCTTCGGCGACACGGTGACCCTGACTGGCCAAATCACGAACGCCAACTTCCCGAACGGAGCACCGCAGCCGGCTGTTA
CCGCGGCCGACACGGCGATTACGTTCAGCGGAACATCCAGCGGTACTTGCACCAACAAGGCTGTGACGGGCGCTGGCAGT
AACGAGAAGCTGGTCTACTCCTGCGTCGTGCCGAAAGGATGGACCGGCGCCATTACCATCGCCGTCGATCCCACCGGGGG
GACGTATACCTATCTCTCGCCAGGCGGTACGCCTTGCAACGGATCGACCACGGGTTCCTGCACCCTGGCATCGATAACCT
CGGCGCTGGCGGATGTGGATGGTACCTCGAGCTCGGCGACGCTCCTGCAAAAACAACAAACCAACGTCGAGGCGCGGCGC
TGA

Upstream 100 bases:

>100_bases
TCGACTCCGAAGTTTTGGAAAACCTGAAAAACAGCCCATCCGGTCGCAATTTGGCGCGCATTCCCGGCGCCTGGTCGGAT
GTTCAGTGATGGAGACGGCT

Downstream 100 bases:

>100_bases
CACGCACACGCGTAGTCACGGAATCGGGGCCTTCGGGCCCCGATTCTTTTTAGCTTTGGGCGGAAATCGTCAGGACTGGT
TTGGAGGTGCAGGTGATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 880; Mature: 879

Protein sequence:

>880_residues
MPRFPGQIGTRHQGGFSLVEALFSALILAVALLGLAGFHAAAMQDGSLVKARSIAASLAQEKLDDLRGFTRLEDDATTTG
VNECADPTFCFSEIANNAGGRENSGSLLLPSGTVSGYTDSYSLEWAVTCAAETAGSALSFSSTCTDPTAKLATVTVSWTD
SKGGPQEVELQGVIYAMDPARMAMGTASAFSTQKPVAGYTPVGVPDAVPVPINTGGSQFKESSKPLPEVSQSGDGINVSF
DSVVYSRDGAGYQKDSQEEFSSVTCECQFNSGTGTGYTPTRKVWNGSRLVNQAGEAVTKKTGQPLGNNPPSQCDVCCRDH
HDRAANDPKYDPKRPTSDYTGSEDHKHYWYSSCVSGGVGAANCTDANKDASLASGSAFTEVTDGAYLESCRVGRVDGFWR
VMQDWQLRKVTILPYNFLLNNQTNLNNYVDVVEKVVENAVKTDSGGSGVTVPTLGGRDLTLPSGSDPVQLLSRAVYVDTI
YNAEDDPATSSVNEQNTVDTAYYSALLAKVTASQTASNSAWLEFAPFYEANLTLLFDWISSDTGVATVTSEAINAIVDPV
NRYYGSFSRGKVTVQSGTTAGTSTITAKARLSNSGVTGGVNVNVNPTPPTYVPGVSYGTDVYDNLSSNVLADTITVSRPA
AGTAHSITGKVVKGNGSANVAETGTPASPITVTLNTTSGSVISPCSAQVGDSDVYAWYYSCTVSNGWTGTLTVGSTGSVY
TFDDATSRSLSTSSMTVANATTVGQVIAFGDTVTLTGQITNANFPNGAPQPAVTAADTAITFSGTSSGTCTNKAVTGAGS
NEKLVYSCVVPKGWTGAITIAVDPTGGTYTYLSPGGTPCNGSTTGSCTLASITSALADVDGTSSSATLLQKQQTNVEARR

Sequences:

>Translated_880_residues
MPRFPGQIGTRHQGGFSLVEALFSALILAVALLGLAGFHAAAMQDGSLVKARSIAASLAQEKLDDLRGFTRLEDDATTTG
VNECADPTFCFSEIANNAGGRENSGSLLLPSGTVSGYTDSYSLEWAVTCAAETAGSALSFSSTCTDPTAKLATVTVSWTD
SKGGPQEVELQGVIYAMDPARMAMGTASAFSTQKPVAGYTPVGVPDAVPVPINTGGSQFKESSKPLPEVSQSGDGINVSF
DSVVYSRDGAGYQKDSQEEFSSVTCECQFNSGTGTGYTPTRKVWNGSRLVNQAGEAVTKKTGQPLGNNPPSQCDVCCRDH
HDRAANDPKYDPKRPTSDYTGSEDHKHYWYSSCVSGGVGAANCTDANKDASLASGSAFTEVTDGAYLESCRVGRVDGFWR
VMQDWQLRKVTILPYNFLLNNQTNLNNYVDVVEKVVENAVKTDSGGSGVTVPTLGGRDLTLPSGSDPVQLLSRAVYVDTI
YNAEDDPATSSVNEQNTVDTAYYSALLAKVTASQTASNSAWLEFAPFYEANLTLLFDWISSDTGVATVTSEAINAIVDPV
NRYYGSFSRGKVTVQSGTTAGTSTITAKARLSNSGVTGGVNVNVNPTPPTYVPGVSYGTDVYDNLSSNVLADTITVSRPA
AGTAHSITGKVVKGNGSANVAETGTPASPITVTLNTTSGSVISPCSAQVGDSDVYAWYYSCTVSNGWTGTLTVGSTGSVY
TFDDATSRSLSTSSMTVANATTVGQVIAFGDTVTLTGQITNANFPNGAPQPAVTAADTAITFSGTSSGTCTNKAVTGAGS
NEKLVYSCVVPKGWTGAITIAVDPTGGTYTYLSPGGTPCNGSTTGSCTLASITSALADVDGTSSSATLLQKQQTNVEARR
>Mature_879_residues
PRFPGQIGTRHQGGFSLVEALFSALILAVALLGLAGFHAAAMQDGSLVKARSIAASLAQEKLDDLRGFTRLEDDATTTGV
NECADPTFCFSEIANNAGGRENSGSLLLPSGTVSGYTDSYSLEWAVTCAAETAGSALSFSSTCTDPTAKLATVTVSWTDS
KGGPQEVELQGVIYAMDPARMAMGTASAFSTQKPVAGYTPVGVPDAVPVPINTGGSQFKESSKPLPEVSQSGDGINVSFD
SVVYSRDGAGYQKDSQEEFSSVTCECQFNSGTGTGYTPTRKVWNGSRLVNQAGEAVTKKTGQPLGNNPPSQCDVCCRDHH
DRAANDPKYDPKRPTSDYTGSEDHKHYWYSSCVSGGVGAANCTDANKDASLASGSAFTEVTDGAYLESCRVGRVDGFWRV
MQDWQLRKVTILPYNFLLNNQTNLNNYVDVVEKVVENAVKTDSGGSGVTVPTLGGRDLTLPSGSDPVQLLSRAVYVDTIY
NAEDDPATSSVNEQNTVDTAYYSALLAKVTASQTASNSAWLEFAPFYEANLTLLFDWISSDTGVATVTSEAINAIVDPVN
RYYGSFSRGKVTVQSGTTAGTSTITAKARLSNSGVTGGVNVNVNPTPPTYVPGVSYGTDVYDNLSSNVLADTITVSRPAA
GTAHSITGKVVKGNGSANVAETGTPASPITVTLNTTSGSVISPCSAQVGDSDVYAWYYSCTVSNGWTGTLTVGSTGSVYT
FDDATSRSLSTSSMTVANATTVGQVIAFGDTVTLTGQITNANFPNGAPQPAVTAADTAITFSGTSSGTCTNKAVTGAGSN
EKLVYSCVVPKGWTGAITIAVDPTGGTYTYLSPGGTPCNGSTTGSCTLASITSALADVDGTSSSATLLQKQQTNVEARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91304; Mature: 91173

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRFPGQIGTRHQGGFSLVEALFSALILAVALLGLAGFHAAAMQDGSLVKARSIAASLAQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EKLDDLRGFTRLEDDATTTGVNECADPTFCFSEIANNAGGRENSGSLLLPSGTVSGYTDS
HHHHHHHCCHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC
YSLEWAVTCAAETAGSALSFSSTCTDPTAKLATVTVSWTDSKGGPQEVELQGVIYAMDPA
EEEEEEEEEECCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEEECCH
RMAMGTASAFSTQKPVAGYTPVGVPDAVPVPINTGGSQFKESSKPLPEVSQSGDGINVSF
HHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCHHHCCCCCEEEEE
DSVVYSRDGAGYQKDSQEEFSSVTCECQFNSGTGTGYTPTRKVWNGSRLVNQAGEAVTKK
HHEEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
TGQPLGNNPPSQCDVCCRDHHDRAANDPKYDPKRPTSDYTGSEDHKHYWYSSCVSGGVGA
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
ANCTDANKDASLASGSAFTEVTDGAYLESCRVGRVDGFWRVMQDWQLRKVTILPYNFLLN
CCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCHHHHHHHHCCCEEEEEEEEEEEEEC
NQTNLNNYVDVVEKVVENAVKTDSGGSGVTVPTLGGRDLTLPSGSDPVQLLSRAVYVDTI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHEEEEEE
YNAEDDPATSSVNEQNTVDTAYYSALLAKVTASQTASNSAWLEFAPFYEANLTLLFDWIS
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECC
SDTGVATVTSEAINAIVDPVNRYYGSFSRGKVTVQSGTTAGTSTITAKARLSNSGVTGGV
CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCE
NVNVNPTPPTYVPGVSYGTDVYDNLSSNVLADTITVSRPAAGTAHSITGKVVKGNGSANV
EEEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCC
AETGTPASPITVTLNTTSGSVISPCSAQVGDSDVYAWYYSCTVSNGWTGTLTVGSTGSVY
CCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEE
TFDDATSRSLSTSSMTVANATTVGQVIAFGDTVTLTGQITNANFPNGAPQPAVTAADTAI
EECCCCCCCCCCCCEEEECCHHHCEEEEECCEEEEEEEEECCCCCCCCCCCCEEECCEEE
TFSGTSSGTCTNKAVTGAGSNEKLVYSCVVPKGWTGAITIAVDPTGGTYTYLSPGGTPCN
EECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCC
GSTTGSCTLASITSALADVDGTSSSATLLQKQQTNVEARR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRFPGQIGTRHQGGFSLVEALFSALILAVALLGLAGFHAAAMQDGSLVKARSIAASLAQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EKLDDLRGFTRLEDDATTTGVNECADPTFCFSEIANNAGGRENSGSLLLPSGTVSGYTDS
HHHHHHHCCHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC
YSLEWAVTCAAETAGSALSFSSTCTDPTAKLATVTVSWTDSKGGPQEVELQGVIYAMDPA
EEEEEEEEEECCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEEECCH
RMAMGTASAFSTQKPVAGYTPVGVPDAVPVPINTGGSQFKESSKPLPEVSQSGDGINVSF
HHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCHHHCCCCCEEEEE
DSVVYSRDGAGYQKDSQEEFSSVTCECQFNSGTGTGYTPTRKVWNGSRLVNQAGEAVTKK
HHEEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
TGQPLGNNPPSQCDVCCRDHHDRAANDPKYDPKRPTSDYTGSEDHKHYWYSSCVSGGVGA
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
ANCTDANKDASLASGSAFTEVTDGAYLESCRVGRVDGFWRVMQDWQLRKVTILPYNFLLN
CCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCHHHHHHHHCCCEEEEEEEEEEEEEC
NQTNLNNYVDVVEKVVENAVKTDSGGSGVTVPTLGGRDLTLPSGSDPVQLLSRAVYVDTI
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHHEEEEEE
YNAEDDPATSSVNEQNTVDTAYYSALLAKVTASQTASNSAWLEFAPFYEANLTLLFDWIS
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECC
SDTGVATVTSEAINAIVDPVNRYYGSFSRGKVTVQSGTTAGTSTITAKARLSNSGVTGGV
CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCE
NVNVNPTPPTYVPGVSYGTDVYDNLSSNVLADTITVSRPAAGTAHSITGKVVKGNGSANV
EEEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCC
AETGTPASPITVTLNTTSGSVISPCSAQVGDSDVYAWYYSCTVSNGWTGTLTVGSTGSVY
CCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEE
TFDDATSRSLSTSSMTVANATTVGQVIAFGDTVTLTGQITNANFPNGAPQPAVTAADTAI
EECCCCCCCCCCCCEEEECCHHHCEEEEECCEEEEEEEEECCCCCCCCCCCCEEECCEEE
TFSGTSSGTCTNKAVTGAGSNEKLVYSCVVPKGWTGAITIAVDPTGGTYTYLSPGGTPCN
EECCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCC
GSTTGSCTLASITSALADVDGTSSSATLLQKQQTNVEARR
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA