| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317853
Identifier: 74317853
GI number: 74317853
Start: 1934226
End: 1934954
Strand: Reverse
Name: 74317853
Synonym: Tbd_1835
Alternate gene names: NA
Gene position: 1934954-1934226 (Counterclockwise)
Preceding gene: 74317854
Following gene: 74317851
Centisome position: 66.5
GC content: 69.27
Gene sequence:
>729_bases ATGAAATCGGTAGTGTCCGACGAAATCCTGCAGGCTTTTGTCGACGGGGAACTCAGTGTTCCCGAGAGCGAGGCGCTCGT TGCGCGCATGCGCGAGGACAGCGAACTGGCGCAGCGCGTCTGCAGCCTTCGCAGCCTGAAGAGCATGGTGCAACTCGCGT ACGCGCGGCCCCCGGGGCCGGCCCGCAGCGAGCGCGCCGTGCCCCGCCGCCAGCTGGCGCGGCGCTGTGCCTTCGGCTGT CTCATGCTCGCGGCCGGTATCGGAGGCTGGGCCTTGCGCGGCGTCGACATCGACACCGCGGCCGCGGCGCGCCTGTTGGC CTTGCCGGACGGGTATCAGGTCGTCAGCCTGGCGCGCGAGGTCGATCCGAACCGGGTCCTGCTGCATCTCGACTCCGCCG CGCCCGAGCGGATGCGTGCGGTGCTCGACCGCGCGGAACGGCTGCTCGACGAGGCCGAACGGGAACGGCGCCCCCTGGAA CTCGAAGTCATCGCCAACAGCCGTGGGATCGAATTGCTGCGCGCGGGTCACAGCCCCTATGCCGAACGCGTGGCGCGCAT GACGCAGCGGCATGTCAACCTGCAATGGGTCGCGTGCGGCCAGTCGATCGCGCGTTACAGGAGTGAGGGTCAGCGGGTCG AACTCCTGCCTCCTACGCGCACGGCGCCGACCGCGATCGGCGAAATCGTCACCCGCCTGCAGCAGGGGTGGACCTACATC CGGGTCTAA
Upstream 100 bases:
>100_bases TCGGCACCGTGATGAGCCGCCTGTCGCGGGCCCGTGCCAACCTGAAGAAACGGCTCGACGCGGCACAAACCGCGGCCGGG CCGTCATTGTGGAGGGTGAA
Downstream 100 bases:
>100_bases GCGCCTTCCCGTTCCATCCTTACCGCTGAGCGGTGCATCCAGCGTACGTTATTCGAGCGCCGGCTCGGGCGGCATCGGCA GGGCGCGCTGCAGCGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKSVVSDEILQAFVDGELSVPESEALVARMREDSELAQRVCSLRSLKSMVQLAYARPPGPARSERAVPRRQLARRCAFGC LMLAAGIGGWALRGVDIDTAAAARLLALPDGYQVVSLAREVDPNRVLLHLDSAAPERMRAVLDRAERLLDEAERERRPLE LEVIANSRGIELLRAGHSPYAERVARMTQRHVNLQWVACGQSIARYRSEGQRVELLPPTRTAPTAIGEIVTRLQQGWTYI RV
Sequences:
>Translated_242_residues MKSVVSDEILQAFVDGELSVPESEALVARMREDSELAQRVCSLRSLKSMVQLAYARPPGPARSERAVPRRQLARRCAFGC LMLAAGIGGWALRGVDIDTAAAARLLALPDGYQVVSLAREVDPNRVLLHLDSAAPERMRAVLDRAERLLDEAERERRPLE LEVIANSRGIELLRAGHSPYAERVARMTQRHVNLQWVACGQSIARYRSEGQRVELLPPTRTAPTAIGEIVTRLQQGWTYI RV >Mature_242_residues MKSVVSDEILQAFVDGELSVPESEALVARMREDSELAQRVCSLRSLKSMVQLAYARPPGPARSERAVPRRQLARRCAFGC LMLAAGIGGWALRGVDIDTAAAARLLALPDGYQVVSLAREVDPNRVLLHLDSAAPERMRAVLDRAERLLDEAERERRPLE LEVIANSRGIELLRAGHSPYAERVARMTQRHVNLQWVACGQSIARYRSEGQRVELLPPTRTAPTAIGEIVTRLQQGWTYI RV
Specific function: Unknown
COG id: COG1416
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26925; Mature: 26925
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVVSDEILQAFVDGELSVPESEALVARMREDSELAQRVCSLRSLKSMVQLAYARPPGP CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC ARSERAVPRRQLARRCAFGCLMLAAGIGGWALRGVDIDTAAAARLLALPDGYQVVSLARE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHH VDPNRVLLHLDSAAPERMRAVLDRAERLLDEAERERRPLELEVIANSRGIELLRAGHSPY CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHH AERVARMTQRHVNLQWVACGQSIARYRSEGQRVELLPPTRTAPTAIGEIVTRLQQGWTYI HHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEE RV CC >Mature Secondary Structure MKSVVSDEILQAFVDGELSVPESEALVARMREDSELAQRVCSLRSLKSMVQLAYARPPGP CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC ARSERAVPRRQLARRCAFGCLMLAAGIGGWALRGVDIDTAAAARLLALPDGYQVVSLARE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHH VDPNRVLLHLDSAAPERMRAVLDRAERLLDEAERERRPLELEVIANSRGIELLRAGHSPY CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHH AERVARMTQRHVNLQWVACGQSIARYRSEGQRVELLPPTRTAPTAIGEIVTRLQQGWTYI HHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEE RV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA