| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317818
Identifier: 74317818
GI number: 74317818
Start: 1902137
End: 1902766
Strand: Reverse
Name: 74317818
Synonym: Tbd_1800
Alternate gene names: NA
Gene position: 1902766-1902137 (Counterclockwise)
Preceding gene: 74317819
Following gene: 74317817
Centisome position: 65.39
GC content: 61.11
Gene sequence:
>630_bases ATGAAATTCGCAATTACTAAAATGGCCGCCGGACTGGTACTCGCAGGTTTTGCCACTGTTGCAAGTGCGGTCCCGACCGC CATTACGTCGATGACCGTTACGGGCGGCACATTCTCAATGAATGGCGGCGCCGCGGACTCGTTTATCGCGGCGAATATCG ATCCCGCCTTTGACGTTGTCGGCGGGTACGGCACTGTGAACCTCAATGCCCCGACCAGCGGCCTTTTCAACTTCGGTGTC TTCGGCCCGGTGTCGGTGTTCACCGGTCCGGGTTCCACGACGCCTTTCGGTGGGTCTTCGATCGCCCCGGGCGGCCCCGT GCCGAGCGGAACGGCCGAACTCGGCGGCGCGCTGAACATTGACATGTCGTCTTGGACTGCTTACTGGAACGGGAACTACT TTAACCAAGGCGCAGCAGGCGTGACCGGAACGGTCGATGCCGCCGGTAACTACACGATGTCTTGGACGTCGACCATTAGC GGCGGCCCCTTCGATGGCTCCACCGGCGGCTGGACGGTTAACGGGACGCTGGCCGTTGCGCCGATTCCTGAGGCGTCGAC CTACGGCATGATGCTCGCCGGCTTGGGTTTGGTGGGATTTGCGGTTCGTCGTCGTAAGTTGGTTGCTTGA
Upstream 100 bases:
>100_bases TGAGTCGCCGCGAAAGCTTCACAGGTGAAAAGAGTCGTACACCAAGTGGCAGGAGGATGTAGGTGTTGTTCGATCGATAC TTTCTACATGAGGAGACAAA
Downstream 100 bases:
>100_bases GATAGCGTATCCGCTGTGTCGCGGTTTGATGTAAGCGGTAAAAATGCAGCGGGGTTCCCCGCTGCATTTTTTTTGTTCGT TCCGCGGCTGGCGAGCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKFAITKMAAGLVLAGFATVASAVPTAITSMTVTGGTFSMNGGAADSFIAANIDPAFDVVGGYGTVNLNAPTSGLFNFGV FGPVSVFTGPGSTTPFGGSSIAPGGPVPSGTAELGGALNIDMSSWTAYWNGNYFNQGAAGVTGTVDAAGNYTMSWTSTIS GGPFDGSTGGWTVNGTLAVAPIPEASTYGMMLAGLGLVGFAVRRRKLVA
Sequences:
>Translated_209_residues MKFAITKMAAGLVLAGFATVASAVPTAITSMTVTGGTFSMNGGAADSFIAANIDPAFDVVGGYGTVNLNAPTSGLFNFGV FGPVSVFTGPGSTTPFGGSSIAPGGPVPSGTAELGGALNIDMSSWTAYWNGNYFNQGAAGVTGTVDAAGNYTMSWTSTIS GGPFDGSTGGWTVNGTLAVAPIPEASTYGMMLAGLGLVGFAVRRRKLVA >Mature_209_residues MKFAITKMAAGLVLAGFATVASAVPTAITSMTVTGGTFSMNGGAADSFIAANIDPAFDVVGGYGTVNLNAPTSGLFNFGV FGPVSVFTGPGSTTPFGGSSIAPGGPVPSGTAELGGALNIDMSSWTAYWNGNYFNQGAAGVTGTVDAAGNYTMSWTSTIS GGPFDGSTGGWTVNGTLAVAPIPEASTYGMMLAGLGLVGFAVRRRKLVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20676; Mature: 20676
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAITKMAAGLVLAGFATVASAVPTAITSMTVTGGTFSMNGGAADSFIAANIDPAFDVV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCEEEECCCCHHEEC GGYGTVNLNAPTSGLFNFGVFGPVSVFTGPGSTTPFGGSSIAPGGPVPSGTAELGGALNI CCCEEEEECCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEE DMSSWTAYWNGNYFNQGAAGVTGTVDAAGNYTMSWTSTISGGPFDGSTGGWTVNGTLAVA ECCCEEEEECCCEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCEEEEE PIPEASTYGMMLAGLGLVGFAVRRRKLVA ECCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFAITKMAAGLVLAGFATVASAVPTAITSMTVTGGTFSMNGGAADSFIAANIDPAFDVV CCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCEEEECCCCHHEEC GGYGTVNLNAPTSGLFNFGVFGPVSVFTGPGSTTPFGGSSIAPGGPVPSGTAELGGALNI CCCEEEEECCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEE DMSSWTAYWNGNYFNQGAAGVTGTVDAAGNYTMSWTSTISGGPFDGSTGGWTVNGTLAVA ECCCEEEEECCCEECCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCEEEEE PIPEASTYGMMLAGLGLVGFAVRRRKLVA ECCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA