| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317809
Identifier: 74317809
GI number: 74317809
Start: 1892353
End: 1893045
Strand: Reverse
Name: 74317809
Synonym: Tbd_1791
Alternate gene names: NA
Gene position: 1893045-1892353 (Counterclockwise)
Preceding gene: 74317810
Following gene: 74317808
Centisome position: 65.06
GC content: 59.88
Gene sequence:
>693_bases ATGAAACTCGACAGCTTCAAGCCCCTCCTCATCGGGTTATGCATGTTTGCCGCTGCAGGCGCCGCGCTCGCACTCAAGCC GACGACCAAGGTCGCGGAGAATGGTCCTAAGGTCAACCTAGAGGAGCTGATTCCAGAAAAATTCGGCGACTGGACGATCG ATAGCACCGTCGCACCGCTGGTAGCCAACCCTCAGCAAACGGCGCTGATTGAAAAGATCTACAGCGATACGCTGTCGCGG ACCTACGTGAACCGGGACGGCGACCGCATCATGCTCGCGGTCGCGTACGGAGGCGACCAGACGGATACGATGGCTGTGCA CAAGCCGGAAGTATGCTATCCCGCCCAAGGCTTCGAGATACTCAAGAACACGTCGGATACCTTTTCGATCGGGAAGGCGC GCATCCCCGTCAAGCGTCTGGTCGCCACCCAGGGACCGCGGATCGAGCCCATCACCTATTGGACCACCGTCGGGGACGCC GTCACCGTAAGCGGCGTAACGAGGAAGCTCAACCAATTGAAATACGGCCTCACCGGCAAGATCCCCGACGGCCTGCTGTT CAGGGTTTCCAGCATCCAAGCCGACGACGCCAAAGCCTATCAGGCACAAGACGCGTTTGCCCGAGATCTGCTCAGGGCGA TGTCGCCGGCCGGGCGAAAGCGCATCGTTGGAACCTCCAACCCAACGAGTTGA
Upstream 100 bases:
>100_bases TCCTGTTTCTGTTCCTGCTGGACGCGCTGCTGGGATTCGTCTTTCCCGACCGTCCGCGCGTAAAGGCGAAGGCCTGATCG TTCGACCTCCGGAGCCCCCC
Downstream 100 bases:
>100_bases ATGGCCCCGGCAGCCAAGTTACTGCAGTGTTGCAGTGGGCGGCTATTTTTCTCGCTTTTGCGATAAGTGAGTCGGATTCG CCCAGAGCGGCACCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Exopolysaccharide Methanolan Synthase; Epsi Family Protein; Methanolan Biosynthesis EpsI
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKLDSFKPLLIGLCMFAAAGAALALKPTTKVAENGPKVNLEELIPEKFGDWTIDSTVAPLVANPQQTALIEKIYSDTLSR TYVNRDGDRIMLAVAYGGDQTDTMAVHKPEVCYPAQGFEILKNTSDTFSIGKARIPVKRLVATQGPRIEPITYWTTVGDA VTVSGVTRKLNQLKYGLTGKIPDGLLFRVSSIQADDAKAYQAQDAFARDLLRAMSPAGRKRIVGTSNPTS
Sequences:
>Translated_230_residues MKLDSFKPLLIGLCMFAAAGAALALKPTTKVAENGPKVNLEELIPEKFGDWTIDSTVAPLVANPQQTALIEKIYSDTLSR TYVNRDGDRIMLAVAYGGDQTDTMAVHKPEVCYPAQGFEILKNTSDTFSIGKARIPVKRLVATQGPRIEPITYWTTVGDA VTVSGVTRKLNQLKYGLTGKIPDGLLFRVSSIQADDAKAYQAQDAFARDLLRAMSPAGRKRIVGTSNPTS >Mature_230_residues MKLDSFKPLLIGLCMFAAAGAALALKPTTKVAENGPKVNLEELIPEKFGDWTIDSTVAPLVANPQQTALIEKIYSDTLSR TYVNRDGDRIMLAVAYGGDQTDTMAVHKPEVCYPAQGFEILKNTSDTFSIGKARIPVKRLVATQGPRIEPITYWTTVGDA VTVSGVTRKLNQLKYGLTGKIPDGLLFRVSSIQADDAKAYQAQDAFARDLLRAMSPAGRKRIVGTSNPTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24919; Mature: 24919
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDSFKPLLIGLCMFAAAGAALALKPTTKVAENGPKVNLEELIPEKFGDWTIDSTVAPL CCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCH VANPQQTALIEKIYSDTLSRTYVNRDGDRIMLAVAYGGDQTDTMAVHKPEVCYPAQGFEI HCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCHHH LKNTSDTFSIGKARIPVKRLVATQGPRIEPITYWTTVGDAVTVSGVTRKLNQLKYGLTGK HHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCCC IPDGLLFRVSSIQADDAKAYQAQDAFARDLLRAMSPAGRKRIVGTSNPTS CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure MKLDSFKPLLIGLCMFAAAGAALALKPTTKVAENGPKVNLEELIPEKFGDWTIDSTVAPL CCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCHHHHHHHHCCCEECCCCCCCH VANPQQTALIEKIYSDTLSRTYVNRDGDRIMLAVAYGGDQTDTMAVHKPEVCYPAQGFEI HCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCHHH LKNTSDTFSIGKARIPVKRLVATQGPRIEPITYWTTVGDAVTVSGVTRKLNQLKYGLTGK HHCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCCC IPDGLLFRVSSIQADDAKAYQAQDAFARDLLRAMSPAGRKRIVGTSNPTS CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA