Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317808

Identifier: 74317808

GI number: 74317808

Start: 1890703

End: 1892226

Strand: Reverse

Name: 74317808

Synonym: Tbd_1790

Alternate gene names: NA

Gene position: 1892226-1890703 (Counterclockwise)

Preceding gene: 74317809

Following gene: 74317807

Centisome position: 65.03

GC content: 56.76

Gene sequence:

>1524_bases
TTGAAGTCACAGTGGTTCGGTCGGTCGGCCGCAATCGGGCAGTACTCGACGCACACCCATTTCTCGGTGCTCGGTGTGCT
CGCTTTCATGCTTGTGGCGATCGCCCTCATTCTGCTGGCGGCCCTCATGGGTGCCTCTTTGGCGATCGGATTCTGGCCTT
TCGCCGTCGCCCTGGTTGGCGGCGTTTTCGTGCTTGGGTTCTATGCGGTTCTTGGCGGGAGAAGCGGGCCGGGGCTGCGC
GACTCCTTTTTCTGGCTCGCGTTCGTGCTGATCTTCGCGACCGACTCGCTGAAAAAAGTCACGGGCTACTCCGCCAATTT
CGTTCTGGAGTTTTCTCTCATCCTGGCCGCGCCCCTGCTTGTCCCGACGCTCGTCCGCCTGCTCTCCGAATCGCGATTCT
TCAAATGGTGGTTCGCAGGGCTCTCCGTTTTTTTCATCCTATCGCTGCTAAGCAGTTTTTTTGGAAGGTCCCATGTTTTC
GCTGCGGCCTTCCAGTTTTTGACCAACCTGAAGTTCATACTGATTCTACTGTTGGGGTTTTATATTGTCTGGAGTGCCCG
GACAGAGGCAATCTTCTGGTGGATCGTACGCTGGCTTTGGTTGCCGACCGCGATGCTCGTAGCTTGGCAGTGGGGGCACC
CATCGAGCTATTTTGGGCTAATGCCCTACGCCACCGCATCGGCGGATCCGCTGCAATTGTTTCCGTCGCGAGCCGTAGGA
CCGTTCAGCCATCCGACGTACCTCGGACTGTACATGGGTGTTCTCACAGTGTTTTGTGTGATCAATGCTATCTCCGGGGC
CGGCCGCCGTTACTTCGTGATAGCGCTATGTTATTTTCTTCTGCTGCTTGCATCAGCACAGCGGCAGGAAACGGTCGCAG
CGATCGTTGCCGCTACGGCAGCGGTGGGCCTCCTCCACGGCAAGCGGTTTGCTTTGCGAAGCGCGGTTATCGGCCTAGTC
ACCGTTCTGGCGGTGGGCGGCGGGGCCTGGCTTCTTATCAAGGATAACCTCGTTCAGGAGGCGACAAAATGGGGCGTGAT
TGGACACTCGGCAATTCAGCAGCCAAGACAGGTTCTCTACATTCATGCCGTTGAAATTGCGGATCAATATGCCCCCCTCG
GAAGCGGCCTCGGAACCTTCGCCGGGGCCGGCGCACAGAAGTTCGACATTTCGCTGTATCTGGATCGCGGTTTTGCGCGG
TATTCCTGGTTCTATAAGCAGAACGTGCTGATGGACACATACTGGACGAACTTCCTAGCCGAGACGGGTTGGGCCGGCGC
GCTCCTGCTGTTAGCCCTGACGCTATTGCTGGTTGCGTTTACCGCAGTCAACAGCCTCGAGAAATATCCGTCGGAAATAA
GGCGTTTTTGGCTGCTAGCGTTTGGGGGCATGGCTTTCGTGTTTTTGCTCTCCTTAACCTCTCCTTCGTTCCAGGACCCG
GGGCTTTTTCTTGTTCCCGGAATTTTTCTTGGCGTCGCGTACAACCGCATGATGGCCTGGAAAAAACCCACAAAGCGAGG
CTGA

Upstream 100 bases:

>100_bases
GTGTTGCAGTGGGCGGCTATTTTTCTCGCTTTTGCGATAAGTGAGTCGGATTCGCCCAGAGCGGCACCGCCGCTATCGTA
AGGATCAGAGAGGTTTCGGT

Downstream 100 bases:

>100_bases
CATATGCAAACAGTTACCGTACGCACCCGTCGCGGAATAAAGTCAGGTTTGACGGCGACAGCCACACGTTCCGTCCGAAC
CAGCGCCTCAGCGCTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKSQWFGRSAAIGQYSTHTHFSVLGVLAFMLVAIALILLAALMGASLAIGFWPFAVALVGGVFVLGFYAVLGGRSGPGLR
DSFFWLAFVLIFATDSLKKVTGYSANFVLEFSLILAAPLLVPTLVRLLSESRFFKWWFAGLSVFFILSLLSSFFGRSHVF
AAAFQFLTNLKFILILLLGFYIVWSARTEAIFWWIVRWLWLPTAMLVAWQWGHPSSYFGLMPYATASADPLQLFPSRAVG
PFSHPTYLGLYMGVLTVFCVINAISGAGRRYFVIALCYFLLLLASAQRQETVAAIVAATAAVGLLHGKRFALRSAVIGLV
TVLAVGGGAWLLIKDNLVQEATKWGVIGHSAIQQPRQVLYIHAVEIADQYAPLGSGLGTFAGAGAQKFDISLYLDRGFAR
YSWFYKQNVLMDTYWTNFLAETGWAGALLLLALTLLLVAFTAVNSLEKYPSEIRRFWLLAFGGMAFVFLLSLTSPSFQDP
GLFLVPGIFLGVAYNRMMAWKKPTKRG

Sequences:

>Translated_507_residues
MKSQWFGRSAAIGQYSTHTHFSVLGVLAFMLVAIALILLAALMGASLAIGFWPFAVALVGGVFVLGFYAVLGGRSGPGLR
DSFFWLAFVLIFATDSLKKVTGYSANFVLEFSLILAAPLLVPTLVRLLSESRFFKWWFAGLSVFFILSLLSSFFGRSHVF
AAAFQFLTNLKFILILLLGFYIVWSARTEAIFWWIVRWLWLPTAMLVAWQWGHPSSYFGLMPYATASADPLQLFPSRAVG
PFSHPTYLGLYMGVLTVFCVINAISGAGRRYFVIALCYFLLLLASAQRQETVAAIVAATAAVGLLHGKRFALRSAVIGLV
TVLAVGGGAWLLIKDNLVQEATKWGVIGHSAIQQPRQVLYIHAVEIADQYAPLGSGLGTFAGAGAQKFDISLYLDRGFAR
YSWFYKQNVLMDTYWTNFLAETGWAGALLLLALTLLLVAFTAVNSLEKYPSEIRRFWLLAFGGMAFVFLLSLTSPSFQDP
GLFLVPGIFLGVAYNRMMAWKKPTKRG
>Mature_507_residues
MKSQWFGRSAAIGQYSTHTHFSVLGVLAFMLVAIALILLAALMGASLAIGFWPFAVALVGGVFVLGFYAVLGGRSGPGLR
DSFFWLAFVLIFATDSLKKVTGYSANFVLEFSLILAAPLLVPTLVRLLSESRFFKWWFAGLSVFFILSLLSSFFGRSHVF
AAAFQFLTNLKFILILLLGFYIVWSARTEAIFWWIVRWLWLPTAMLVAWQWGHPSSYFGLMPYATASADPLQLFPSRAVG
PFSHPTYLGLYMGVLTVFCVINAISGAGRRYFVIALCYFLLLLASAQRQETVAAIVAATAAVGLLHGKRFALRSAVIGLV
TVLAVGGGAWLLIKDNLVQEATKWGVIGHSAIQQPRQVLYIHAVEIADQYAPLGSGLGTFAGAGAQKFDISLYLDRGFAR
YSWFYKQNVLMDTYWTNFLAETGWAGALLLLALTLLLVAFTAVNSLEKYPSEIRRFWLLAFGGMAFVFLLSLTSPSFQDP
GLFLVPGIFLGVAYNRMMAWKKPTKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55887; Mature: 55887

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQWFGRSAAIGQYSTHTHFSVLGVLAFMLVAIALILLAALMGASLAIGFWPFAVALVG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFVLGFYAVLGGRSGPGLRDSFFWLAFVLIFATDSLKKVTGYSANFVLEFSLILAAPLL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VPTLVRLLSESRFFKWWFAGLSVFFILSLLSSFFGRSHVFAAAFQFLTNLKFILILLLGF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
YIVWSARTEAIFWWIVRWLWLPTAMLVAWQWGHPSSYFGLMPYATASADPLQLFPSRAVG
HHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PFSHPTYLGLYMGVLTVFCVINAISGAGRRYFVIALCYFLLLLASAQRQETVAAIVAATA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AVGLLHGKRFALRSAVIGLVTVLAVGGGAWLLIKDNLVQEATKWGVIGHSAIQQPRQVLY
HHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCHHHHHCHHHEEH
IHAVEIADQYAPLGSGLGTFAGAGAQKFDISLYLDRGFARYSWFYKQNVLMDTYWTNFLA
HHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHH
ETGWAGALLLLALTLLLVAFTAVNSLEKYPSEIRRFWLLAFGGMAFVFLLSLTSPSFQDP
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GLFLVPGIFLGVAYNRMMAWKKPTKRG
CEEHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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CEEHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA