| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317799
Identifier: 74317799
GI number: 74317799
Start: 1880384
End: 1881481
Strand: Reverse
Name: 74317799
Synonym: Tbd_1781
Alternate gene names: NA
Gene position: 1881481-1880384 (Counterclockwise)
Preceding gene: 74317800
Following gene: 74317798
Centisome position: 64.66
GC content: 64.39
Gene sequence:
>1098_bases GTGAACAAGTCAATTCGCATCCTCGGTACACGCGGGGTACCTGCCGCGCATGGCGGCTTCGAGACCTTTGCCGAGCATCT CGCGCCCTATCTGGTGGAACGCGGCTGGCAGGTGACGGTGTATTGCCAGGAGGACGGCGCCGGGGCGGTGTTCGAGGACG ACTGGCGCGGTGTGCGCCGCGTGCGCATGCCGGTGGCGACCGGCGGCGCGGCGGGGACGATCGTGTTCGACTGGAAATCC ACGCTGCATGCCGCGGGGGAAAAGGGGCTCGTGCTCACCCTCGGTTACAACACGGCGGTGTTTTGTACCCTGTATCGCCT CAAGGGGCTGAAGAACGTCATCAACATGGATGGCGTGGAGTGGCGGCGGCAGAAGTGGGGCGCACTGGCGCGCACGTGGT TCTGGCTGAACGACTGGGCGGGCTGCTGGCTGGGCAATCATCTGGTGGCGGATCATCCCGAAATCAAAACGCATCTCGCC ACGCGGGTGTCACGGGGCAAGATCACGATGATTCCCTATGGCTCGGACCGGGTGGATGCTGCCGACGCGGGATCACTCGC GGCTTACGGACTGGAGCCCGGCGGCTACGCGATCCTGATCGCCCGGGCCGAGCCGGAGAATTCGATTCTCGAAGTGGTGC GGGCCTGGTCGAGCAAGCCGCGCGGCTACAAGCTGGTGGTGCTGGGAAAATACGATCCCGGCCATGCCTATCAGCGTGCG GTAAGGGAGGCGGCCTCGGACGAAGTCGTGTTTCCCGGTGCGATCTACGACAAGGCGGTCGTGCAGGCGCTGCGCTTTCA TGCCCGATTCTACGTGCACGGGCATCAGGTCGGCGGGACCAATCCCTCACTGGTCGAGGCCTTGGGCGCCGGCAACGCGG TGCTGGCGCACGACAACCCGTTCAACCGCTGGGTGGCGGGGGAGGCCGGCGTCTATTTTCACGGCGAGAAGGAATGTGCG CAGCAAATCGAGCATTTGCTCGGTGATGCCGAAAAGGTGACGCAGTTACAGAGCGCGAGCCGGGCACGCCATGCCGCGGC GTTCACTTGGGAGAAAATCCTGGGTGATTACGAGAAGCTGTTGCTGGACTGGGCGTAG
Upstream 100 bases:
>100_bases TCGAACAGTTGTCGGATTTATACAGGCCGCATAACGCCAGAACGAGGGAAATTCTCGAATCCCGGAATTATGCAAACCTA CCTGCGTGGCTTGAGCAGTC
Downstream 100 bases:
>100_bases CGCTCACGATCCAGCCGTTATTTTTTCAAGGAAGATCATCGTGATATTGGTTACGGGGGGCGCCGGTTTCATCGGCGCAA ATTTTGTTCTCGACTGGCTT
Product: glycosyltransferase, RfaG
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyltransferase RfaG; Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Rhamnosyl Transferase WchF; Polysaccharide Biosynthesis Protein/ Rhamnosyl Transferase; Rhamnosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl-(Rhamnosyl) Transferase; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; Glycosyltransferase Protein; Alpha-(1 2)-Rhamnosyltransferase; A-Glycosyltransferase; Rhamnosyltransferase RgpA; Polysaccharide Export Protein; Glycosyltransferase-Like Protein; Alpha-D-GlcNAc Alpha-1 2-L-Rhamnosyltransferase; Glycosyltransferase Family 4 Protein; Glycosyl Transferase GT4 Family Protein
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MNKSIRILGTRGVPAAHGGFETFAEHLAPYLVERGWQVTVYCQEDGAGAVFEDDWRGVRRVRMPVATGGAAGTIVFDWKS TLHAAGEKGLVLTLGYNTAVFCTLYRLKGLKNVINMDGVEWRRQKWGALARTWFWLNDWAGCWLGNHLVADHPEIKTHLA TRVSRGKITMIPYGSDRVDAADAGSLAAYGLEPGGYAILIARAEPENSILEVVRAWSSKPRGYKLVVLGKYDPGHAYQRA VREAASDEVVFPGAIYDKAVVQALRFHARFYVHGHQVGGTNPSLVEALGAGNAVLAHDNPFNRWVAGEAGVYFHGEKECA QQIEHLLGDAEKVTQLQSASRARHAAAFTWEKILGDYEKLLLDWA
Sequences:
>Translated_365_residues MNKSIRILGTRGVPAAHGGFETFAEHLAPYLVERGWQVTVYCQEDGAGAVFEDDWRGVRRVRMPVATGGAAGTIVFDWKS TLHAAGEKGLVLTLGYNTAVFCTLYRLKGLKNVINMDGVEWRRQKWGALARTWFWLNDWAGCWLGNHLVADHPEIKTHLA TRVSRGKITMIPYGSDRVDAADAGSLAAYGLEPGGYAILIARAEPENSILEVVRAWSSKPRGYKLVVLGKYDPGHAYQRA VREAASDEVVFPGAIYDKAVVQALRFHARFYVHGHQVGGTNPSLVEALGAGNAVLAHDNPFNRWVAGEAGVYFHGEKECA QQIEHLLGDAEKVTQLQSASRARHAAAFTWEKILGDYEKLLLDWA >Mature_365_residues MNKSIRILGTRGVPAAHGGFETFAEHLAPYLVERGWQVTVYCQEDGAGAVFEDDWRGVRRVRMPVATGGAAGTIVFDWKS TLHAAGEKGLVLTLGYNTAVFCTLYRLKGLKNVINMDGVEWRRQKWGALARTWFWLNDWAGCWLGNHLVADHPEIKTHLA TRVSRGKITMIPYGSDRVDAADAGSLAAYGLEPGGYAILIARAEPENSILEVVRAWSSKPRGYKLVVLGKYDPGHAYQRA VREAASDEVVFPGAIYDKAVVQALRFHARFYVHGHQVGGTNPSLVEALGAGNAVLAHDNPFNRWVAGEAGVYFHGEKECA QQIEHLLGDAEKVTQLQSASRARHAAAFTWEKILGDYEKLLLDWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40209; Mature: 40209
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSIRILGTRGVPAAHGGFETFAEHLAPYLVERGWQVTVYCQEDGAGAVFEDDWRGVRR CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECHHHHHHHH VRMPVATGGAAGTIVFDWKSTLHAAGEKGLVLTLGYNTAVFCTLYRLKGLKNVINMDGVE EECEEECCCCCEEEEEECHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCH WRRQKWGALARTWFWLNDWAGCWLGNHLVADHPEIKTHLATRVSRGKITMIPYGSDRVDA HHHHHHHHHHHHEEEHHCCCHHHCCCCEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCC ADAGSLAAYGLEPGGYAILIARAEPENSILEVVRAWSSKPRGYKLVVLGKYDPGHAYQRA CCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH VREAASDEVVFPGAIYDKAVVQALRFHARFYVHGHQVGGTNPSLVEALGAGNAVLAHDNP HHHHCCCCEEECCHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHCCCCEEEECCCC FNRWVAGEAGVYFHGEKECAQQIEHLLGDAEKVTQLQSASRARHAAAFTWEKILGDYEKL CCCEECCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDWA HHCCC >Mature Secondary Structure MNKSIRILGTRGVPAAHGGFETFAEHLAPYLVERGWQVTVYCQEDGAGAVFEDDWRGVRR CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECHHHHHHHH VRMPVATGGAAGTIVFDWKSTLHAAGEKGLVLTLGYNTAVFCTLYRLKGLKNVINMDGVE EECEEECCCCCEEEEEECHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCH WRRQKWGALARTWFWLNDWAGCWLGNHLVADHPEIKTHLATRVSRGKITMIPYGSDRVDA HHHHHHHHHHHHEEEHHCCCHHHCCCCEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCC ADAGSLAAYGLEPGGYAILIARAEPENSILEVVRAWSSKPRGYKLVVLGKYDPGHAYQRA CCCCCEEEECCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH VREAASDEVVFPGAIYDKAVVQALRFHARFYVHGHQVGGTNPSLVEALGAGNAVLAHDNP HHHHCCCCEEECCHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHCCCCEEEECCCC FNRWVAGEAGVYFHGEKECAQQIEHLLGDAEKVTQLQSASRARHAAAFTWEKILGDYEKL CCCEECCCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDWA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA