Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yeaZ [H]

Identifier: 74317743

GI number: 74317743

Start: 1810046

End: 1810735

Strand: Reverse

Name: yeaZ [H]

Synonym: Tbd_1725

Alternate gene names: 74317743

Gene position: 1810735-1810046 (Counterclockwise)

Preceding gene: 74317744

Following gene: 74317742

Centisome position: 62.23

GC content: 72.32

Gene sequence:

>690_bases
ATGAAACTGCTCGTCCTCGATACTTCTACCGAGTGGTGCTCCGCGGCGCTGTGGCTGGATGGCCAGGTCGAAGCGCGCCG
CGTGCTCGCCGAACAACGTCACAGCAGTCTGCTGCTGCCGATGGTCGACGACTTGCTGCGCGCGGCCGACGTCCGCCTCG
CCGCGCTCGACGGCATCGCCTACGGCGCGGGACCGGGCTCGTTCACCGGCTTGCGCATCGCGTGCGCGGTCACCCAGGGA
CTGGCGCTCGGCGCCGGCTGCCCGGTCGTCGGCGTGTCGACGCTCGAAGCCATCGCCGAACAGACTGGCGCACCGCGGGT
GCTGACCGTGCTCGACGCCCGCATGTCCGAGGTCTACTGGGCGGCCTACGCACGTGAAGGCGCGGCGTGGCAGGCGCGGG
TCGCACCGCGGCTGGCGCTGCCCGAGTCGGTGCAGGTGCCGGAGGACGGCGACTGGGTCGGCGCCGGCAACGGTTTTGCG
GTCCTCGACGCCGGCTTGCGTGGCGCGCTCGTCGACGCGCTGGTCCGCGTCGACGATACGCTGATGCCCGACGCGGCCGC
GATGGCGCCGCTTGCCGCCGCGGCTTTCGCGCGCGGCGAGGGCGTCGATGCAGCACTCGCCGCACCGATTTATCTGCGCG
ACAAGGTCGCGTTGACGGTCGACGAGCGGCGGGCGAGGGCGCAGGCGTGA

Upstream 100 bases:

>100_bases
GACGTGCTGGTGCTTCCCGACGGCAGCCTGCTCGTCTCCGACGACCACGCGGGCGCGATTTATCGCGTCGTCTACCGGGG
CGAACGGTAAAATTGCGGCC

Downstream 100 bases:

>100_bases
GCAGCCTGCCCGAGGTGGCGGTGCACGAGATCGCGCACCGCGTGCGGCCGATGGCCGACGCCGACCTGCCGCGGGTCGAG
CGGATCGAAGCCGCGAGCTA

Product: glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKLLVLDTSTEWCSAALWLDGQVEARRVLAEQRHSSLLLPMVDDLLRAADVRLAALDGIAYGAGPGSFTGLRIACAVTQG
LALGAGCPVVGVSTLEAIAEQTGAPRVLTVLDARMSEVYWAAYAREGAAWQARVAPRLALPESVQVPEDGDWVGAGNGFA
VLDAGLRGALVDALVRVDDTLMPDAAAMAPLAAAAFARGEGVDAALAAPIYLRDKVALTVDERRARAQA

Sequences:

>Translated_229_residues
MKLLVLDTSTEWCSAALWLDGQVEARRVLAEQRHSSLLLPMVDDLLRAADVRLAALDGIAYGAGPGSFTGLRIACAVTQG
LALGAGCPVVGVSTLEAIAEQTGAPRVLTVLDARMSEVYWAAYAREGAAWQARVAPRLALPESVQVPEDGDWVGAGNGFA
VLDAGLRGALVDALVRVDDTLMPDAAAMAPLAAAAFARGEGVDAALAAPIYLRDKVALTVDERRARAQA
>Mature_229_residues
MKLLVLDTSTEWCSAALWLDGQVEARRVLAEQRHSSLLLPMVDDLLRAADVRLAALDGIAYGAGPGSFTGLRIACAVTQG
LALGAGCPVVGVSTLEAIAEQTGAPRVLTVLDARMSEVYWAAYAREGAAWQARVAPRLALPESVQVPEDGDWVGAGNGFA
VLDAGLRGALVDALVRVDDTLMPDAAAMAPLAAAAFARGEGVDAALAAPIYLRDKVALTVDERRARAQA

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=226, Percent_Identity=43.8053097345133, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 23860; Mature: 23860

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLVLDTSTEWCSAALWLDGQVEARRVLAEQRHSSLLLPMVDDLLRAADVRLAALDGIA
CEEEEEECCCHHHEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHCCEEEEECCEE
YGAGPGSFTGLRIACAVTQGLALGAGCPVVGVSTLEAIAEQTGAPRVLTVLDARMSEVYW
ECCCCCCCCHHEEEEEHHHCCEECCCCCEEHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
AAYAREGAAWQARVAPRLALPESVQVPEDGDWVGAGNGFAVLDAGLRGALVDALVRVDDT
HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHCCC
LMPDAAAMAPLAAAAFARGEGVDAALAAPIYLRDKVALTVDERRARAQA
CCCCHHHHHHHHHHHHHCCCCCCHHHHCCEEEECEEEEEEHHHHHHCCC
>Mature Secondary Structure
MKLLVLDTSTEWCSAALWLDGQVEARRVLAEQRHSSLLLPMVDDLLRAADVRLAALDGIA
CEEEEEECCCHHHEEEEEECCCHHHHHHHHHHHHCCEEHHHHHHHHHHHCCEEEEECCEE
YGAGPGSFTGLRIACAVTQGLALGAGCPVVGVSTLEAIAEQTGAPRVLTVLDARMSEVYW
ECCCCCCCCHHEEEEEHHHCCEECCCCCEEHHHHHHHHHHHCCCCEEEHHHHHHHHHHHH
AAYAREGAAWQARVAPRLALPESVQVPEDGDWVGAGNGFAVLDAGLRGALVDALVRVDDT
HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHCCC
LMPDAAAMAPLAAAAFARGEGVDAALAAPIYLRDKVALTVDERRARAQA
CCCCHHHHHHHHHHHHHCCCCCCHHHHCCEEEECEEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]