| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is rimI [H]
Identifier: 74317742
GI number: 74317742
Start: 1809567
End: 1810049
Strand: Reverse
Name: rimI [H]
Synonym: Tbd_1724
Alternate gene names: 74317742
Gene position: 1810049-1809567 (Counterclockwise)
Preceding gene: 74317743
Following gene: 74317741
Centisome position: 62.21
GC content: 70.39
Gene sequence:
>483_bases GTGAGCAGCCTGCCCGAGGTGGCGGTGCACGAGATCGCGCACCGCGTGCGGCCGATGGCCGACGCCGACCTGCCGCGGGT CGAGCGGATCGAAGCCGCGAGCTACACACACCCCTGGAGCCGCGGCAACTTCGCCGACTCGCTCGCGGCCGGCCATAGCA TGTGGGTGCGCGAAGCCGACGGCGAGCTCATCGGCTACTACGTGATGATGGCGGCTGCAGGCGAGGCGCATCTGCTCAAC CTCACGATCGCACCGGCGTGGCGCCGCCACGGTCTCGGCCGCGATCTGCTCGGGCACTGTCTGGCCTGCGCCTGTGCCCA CCACGCCGCCGCGCTGTTCCTCGAGGTACGCGTTTCGAACGCCGCGGCGATCGCGCTCTACCACGGCAGCGGGTTTACCG ATCTGGCGGTCCGCCGCGGCTATTACCCGGCCGGCGAGGGCCGCGAGGACGCGCTGATCATGAAAAAGGCGCTGCAGTGC TGA
Upstream 100 bases:
>100_bases TCGCGCGCGGCGAGGGCGTCGATGCAGCACTCGCCGCACCGATTTATCTGCGCGACAAGGTCGCGTTGACGGTCGACGAG CGGCGGGCGAGGGCGCAGGC
Downstream 100 bases:
>100_bases GCCGGGACGACGTATATAAGGAACTCGGGATCGCCCCCGCCTGGCGGCTGCGGGATACCGCGTCCGAGGCACGCGCGCCG GTCTGCGGCTGGGAGCAGCT
Product: 30S ribosomal protein S18P alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSSLPEVAVHEIAHRVRPMADADLPRVERIEAASYTHPWSRGNFADSLAAGHSMWVREADGELIGYYVMMAAAGEAHLLN LTIAPAWRRHGLGRDLLGHCLACACAHHAAALFLEVRVSNAAAIALYHGSGFTDLAVRRGYYPAGEGREDALIMKKALQC
Sequences:
>Translated_160_residues MSSLPEVAVHEIAHRVRPMADADLPRVERIEAASYTHPWSRGNFADSLAAGHSMWVREADGELIGYYVMMAAAGEAHLLN LTIAPAWRRHGLGRDLLGHCLACACAHHAAALFLEVRVSNAAAIALYHGSGFTDLAVRRGYYPAGEGREDALIMKKALQC >Mature_159_residues SSLPEVAVHEIAHRVRPMADADLPRVERIEAASYTHPWSRGNFADSLAAGHSMWVREADGELIGYYVMMAAAGEAHLLNL TIAPAWRRHGLGRDLLGHCLACACAHHAAALFLEVRVSNAAAIALYHGSGFTDLAVRRGYYPAGEGREDALIMKKALQC
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=141, Percent_Identity=37.5886524822695, Blast_Score=107, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17374; Mature: 17243
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPEVAVHEIAHRVRPMADADLPRVERIEAASYTHPWSRGNFADSLAAGHSMWVREAD CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCHHEEECCC GELIGYYVMMAAAGEAHLLNLTIAPAWRRHGLGRDLLGHCLACACAHHAAALFLEVRVSN CCHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECC AAAIALYHGSGFTDLAVRRGYYPAGEGREDALIMKKALQC EEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SSLPEVAVHEIAHRVRPMADADLPRVERIEAASYTHPWSRGNFADSLAAGHSMWVREAD CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCHHEEECCC GELIGYYVMMAAAGEAHLLNLTIAPAWRRHGLGRDLLGHCLACACAHHAAALFLEVRVSN CCHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECC AAAIALYHGSGFTDLAVRRGYYPAGEGREDALIMKKALQC EEEEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]