Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ygcG [H]

Identifier: 74317738

GI number: 74317738

Start: 1806050

End: 1807012

Strand: Reverse

Name: ygcG [H]

Synonym: Tbd_1720

Alternate gene names: 74317738

Gene position: 1807012-1806050 (Counterclockwise)

Preceding gene: 74317739

Following gene: 74317737

Centisome position: 62.1

GC content: 69.89

Gene sequence:

>963_bases
GTGGAAGGGACGACACGTGTCACGGGAGCGACGCAAGCCGCGAGCTGCCACGGCGGCCGTGCCGCCCGATGGCGCGCTGG
CTGCTCCCTCAAGATCAGGATGCTGACCCACAGTCTCCTCGGCGCCCGGCGCCGCGTCGGGCATGCCCTGGGCGTTTTTC
TGCTGCTGGTGGCGTCGAGTGCGCTCGCGCAGATCGAGGTGCCCGAGCTCGCGCGGCGCGTGACCGACCTCACTGCCACG
CTTACGCCCGCTCAGGTCGGTGAACTCGAGGGCAGGCTTGCCGCCTTCGAGGCCGAGCGGGGCAGCCAGATCGCGGTGTT
GATCGTGCCGACGACCGAGCCCGAGGACATCGCGCAATTCGGCATCCGCGTCGCCGAGCAATGGAAAATCGGCCGCGAGA
AGGCCGACGACGGGGTGATCCTGATCATCGCCAAGGATGACCGTCGCCTGCGCCTCGAAGTCGGCTACGGTCTCGAGGGC
GCGATCCCCGATGCGATCGCCCGGCGCGTGATTGCCGAAACGATCACGCCGCGTTTCAAGGCGGGCGACTTCTACGGTGG
CATCGTGGCCGGTGTCGAGCAGGTCATGCGTCTGATCGAGGGCGAGGCGCTTCCCCCGCCCGAGCGTAAATCCGCGGTGG
AAGGCGAAGCCTCGTTCGTGCTTCTGGTGGTAGGGGGAATGGCGGCGGGCTGGCTGCTCTCGCTGCTGATGAGTCGCCCT
GCGGCCGGCGGGGTTGCCGCGCTCGGCAGCGGCGCCGTCGGCGCGATGCTGCTCGGCATGACGCCCATGCTGCTCTTGAT
CGCGCTGTTCGTTTTCGCCGGCGTGGTGACAGGGTTCTGGCACGGAGGCGGCGGCTGGGCCAGCCGGGGAGGCGGATTTG
GCGGCCGCGGCGGAGGGTTCGGTGGCGGTTTCGGTGGCGGAGGGGGCGCTTTCGGCGGCGGGGGCGCCTCGGGATCATGG
TGA

Upstream 100 bases:

>100_bases
CCGGGCGCACCGGCGAACGCGCCTGCCAACCAAGGCGCCCCGGCGGGCAGCGGTGCAGCGGGCTATTGACCCGTCGACCG
CGTCGCCGGGGACGCGTTGG

Downstream 100 bases:

>100_bases
ATTTCCGCCGCTGGTTCAGGCATCTCTTCATGCCGCCGCGCGCCTGGCAGCGCGCCTTCCCGCAGGCCACGCTCGACGCG
ATCGAGTCGGCGGTGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASSALAQIEVPELARRVTDLTAT
LTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQFGIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEG
AIPDAIARRVIAETITPRFKAGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP
AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGFGGGFGGGGGAFGGGGASGSW

Sequences:

>Translated_320_residues
MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASSALAQIEVPELARRVTDLTAT
LTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQFGIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEG
AIPDAIARRVIAETITPRFKAGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP
AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGFGGGFGGGGGAFGGGGASGSW
>Mature_320_residues
MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASSALAQIEVPELARRVTDLTAT
LTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQFGIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEG
AIPDAIARRVIAETITPRFKAGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP
AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGFGGGFGGGGGAFGGGGASGSW

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0603 family [H]

Homologues:

Organism=Escherichia coli, GI87082161, Length=140, Percent_Identity=36.4285714285714, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007621 [H]

Pfam domain/function: PF04536 DUF477 [H]

EC number: NA

Molecular weight: Translated: 32800; Mature: 32800

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASS
CCCCCCCCCCCCHHCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAQIEVPELARRVTDLTATLTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQF
HHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHEEEECCCCCEEEEEEEECCCHHHHHHH
GIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEGAIPDAIARRVIAETITPRFK
HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
AGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP
CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCC
AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGF
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GGGFGGGGGAFGGGGASGSW
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEGTTRVTGATQAASCHGGRAARWRAGCSLKIRMLTHSLLGARRRVGHALGVFLLLVASS
CCCCCCCCCCCCHHCCCCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAQIEVPELARRVTDLTATLTPAQVGELEGRLAAFEAERGSQIAVLIVPTTEPEDIAQF
HHHCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHEEEECCCCCEEEEEEEECCCHHHHHHH
GIRVAEQWKIGREKADDGVILIIAKDDRRLRLEVGYGLEGAIPDAIARRVIAETITPRFK
HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
AGDFYGGIVAGVEQVMRLIEGEALPPPERKSAVEGEASFVLLVVGGMAAGWLLSLLMSRP
CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCC
AAGGVAALGSGAVGAMLLGMTPMLLLIALFVFAGVVTGFWHGGGGWASRGGGFGGRGGGF
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
GGGFGGGGGAFGGGGASGSW
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]