| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is hisC2
Identifier: 74317730
GI number: 74317730
Start: 1799486
End: 1800559
Strand: Reverse
Name: hisC2
Synonym: Tbd_1712
Alternate gene names: 74317730
Gene position: 1800559-1799486 (Counterclockwise)
Preceding gene: 74317731
Following gene: 74317729
Centisome position: 61.88
GC content: 65.46
Gene sequence:
>1074_bases ATGAGCCGTACGTCGACGAGCAGGTACTGGAGCGCCGTGGTCGGCGCGCTGACGCCCTATGTGCCGGGCGAACAGCCCAA GCTCGCCAATCTGGTCAAGCTCAACACCAACGAGAATCCCTACGGCCCGAGCCCAAGGGTGCTCGAGGCATTGCGCGGCG AAGTCGGCGACACGCTGCGCCTTTATCCCGACCCGAATTCGGACCGGCTGCGCGCGGCGATTGCGGCGTACCACGCGGTC TCCCCTGATCAGGTCTTCGTCGGCAACGGATCCGACGAAGTGCTGGCGCACACGTTTCTTGCGCTCCTGAAGCACGAGCG GCCGGTCTTCTTTCCCGACATCACCTACAGTTTCTATCCGGTGTACTGCGGCCTTTACGGGATCGCTCATCGCGCGATTC CGCTCGACGACGCGTTCGAGATCCGGGTCGACGATTATCTTGCGCCCAAGGGCGGCGTGATCTTCCCGAATCCGAATGCG CCGACCGGACGGCTGCTGGCCTTGGGCGAGATCGAGCGCCTGCTCGCGGCCAATCGCGACTCGGTGGTCGTCATCGACGA GGCCTACGTCGATTTCGGCGGCGACTCGGCCGTGCCGCTGGTCGCGCGCCATCCGCAGCTTCTCGTCACCCGCACGCTGT CGAAGTCGCACGCGCTCGCCGGCTTGCGCGTCGGCTATGCGGTCGGCCAGGCCCCGCTGATCGAAGCGCTCAATCGCGTG AAAGACAGTTTCAATTCGTATCCGCTCGACCGCTTCGCCCAGGCGGGTGCCCTGGCGTCGATCGAGGACCGCGCCTATTT CGAATCGATCTGCGCGCGCGTGATCGCGACGCGCACCCGGCTCGTCGACGCCATGGAAAGCCTTGGTTTCGAGGTCCTGC CGTCCGCGGCCAACTTCATCTTCGCGCGTCATCCCGCGCATGACGGTGAGGCGCTCGCTGCGCGGCTGCGCGAGCGCAGC ATCATCGTCCGCCATTTCAAGAATCCGGCGCGCATCGCGCCCTTCCTGCGCATCACGGTCGGCACCGACGCACAATGCGA TGCGCTCGTAGACGCCTTGAAAGCCCTGTGCTGA
Upstream 100 bases:
>100_bases AGGCCGGCGCGCAGACGCTCGGCCGCATCGCCGCCACGCTCGCCTACGGCGAGGGGCTGCAGGCGCATGCGCGTTCCGCC GAATATCGCCTGACCCACAA
Downstream 100 bases:
>100_bases AAACGACAGCGGCCTGCTAAAATCCTTTTTACCGTCCGAAAAACGTCGCCATGCGCACCGCCCAAGTCAGCCGCAATACC CTCGAAACCGAGATTACGGT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSRTSTSRYWSAVVGALTPYVPGEQPKLANLVKLNTNENPYGPSPRVLEALRGEVGDTLRLYPDPNSDRLRAAIAAYHAV SPDQVFVGNGSDEVLAHTFLALLKHERPVFFPDITYSFYPVYCGLYGIAHRAIPLDDAFEIRVDDYLAPKGGVIFPNPNA PTGRLLALGEIERLLAANRDSVVVIDEAYVDFGGDSAVPLVARHPQLLVTRTLSKSHALAGLRVGYAVGQAPLIEALNRV KDSFNSYPLDRFAQAGALASIEDRAYFESICARVIATRTRLVDAMESLGFEVLPSAANFIFARHPAHDGEALAARLRERS IIVRHFKNPARIAPFLRITVGTDAQCDALVDALKALC
Sequences:
>Translated_357_residues MSRTSTSRYWSAVVGALTPYVPGEQPKLANLVKLNTNENPYGPSPRVLEALRGEVGDTLRLYPDPNSDRLRAAIAAYHAV SPDQVFVGNGSDEVLAHTFLALLKHERPVFFPDITYSFYPVYCGLYGIAHRAIPLDDAFEIRVDDYLAPKGGVIFPNPNA PTGRLLALGEIERLLAANRDSVVVIDEAYVDFGGDSAVPLVARHPQLLVTRTLSKSHALAGLRVGYAVGQAPLIEALNRV KDSFNSYPLDRFAQAGALASIEDRAYFESICARVIATRTRLVDAMESLGFEVLPSAANFIFARHPAHDGEALAARLRERS IIVRHFKNPARIAPFLRITVGTDAQCDALVDALKALC >Mature_356_residues SRTSTSRYWSAVVGALTPYVPGEQPKLANLVKLNTNENPYGPSPRVLEALRGEVGDTLRLYPDPNSDRLRAAIAAYHAVS PDQVFVGNGSDEVLAHTFLALLKHERPVFFPDITYSFYPVYCGLYGIAHRAIPLDDAFEIRVDDYLAPKGGVIFPNPNAP TGRLLALGEIERLLAANRDSVVVIDEAYVDFGGDSAVPLVARHPQLLVTRTLSKSHALAGLRVGYAVGQAPLIEALNRVK DSFNSYPLDRFAQAGALASIEDRAYFESICARVIATRTRLVDAMESLGFEVLPSAANFIFARHPAHDGEALAARLRERSI IVRHFKNPARIAPFLRITVGTDAQCDALVDALKALC
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=355, Percent_Identity=30.1408450704225, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1788722, Length=261, Percent_Identity=30.6513409961686, Blast_Score=82, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6322075, Length=358, Percent_Identity=28.7709497206704, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS82_THIDA (Q3SI68)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315470.1 - ProteinModelPortal: Q3SI68 - SMR: Q3SI68 - STRING: Q3SI68 - GeneID: 3671295 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1712 - NMPDR: fig|292415.3.peg.1809 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: MRGELND - PhylomeDB: Q3SI68 - ProtClustDB: PRK05387 - BioCyc: TDEN292415:TBD_1712-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 38963; Mature: 38832
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTSTSRYWSAVVGALTPYVPGEQPKLANLVKLNTNENPYGPSPRVLEALRGEVGDTLR CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEE LYPDPNSDRLRAAIAAYHAVSPDQVFVGNGSDEVLAHTFLALLKHERPVFFPDITYSFYP ECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH VYCGLYGIAHRAIPLDDAFEIRVDDYLAPKGGVIFPNPNAPTGRLLALGEIERLLAANRD HHHHHHHHHHHCCCCCCCEEEEECCEECCCCCEEECCCCCCCCCEEEHHHHHHHHHCCCC SVVVIDEAYVDFGGDSAVPLVARHPQLLVTRTLSKSHALAGLRVGYAVGQAPLIEALNRV CEEEEEEHEEECCCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KDSFNSYPLDRFAQAGALASIEDRAYFESICARVIATRTRLVDAMESLGFEVLPSAANFI HHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHEE FARHPAHDGEALAARLRERSIIVRHFKNPARIAPFLRITVGTDAQCDALVDALKALC EEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHHHHHHC >Mature Secondary Structure SRTSTSRYWSAVVGALTPYVPGEQPKLANLVKLNTNENPYGPSPRVLEALRGEVGDTLR CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEE LYPDPNSDRLRAAIAAYHAVSPDQVFVGNGSDEVLAHTFLALLKHERPVFFPDITYSFYP ECCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH VYCGLYGIAHRAIPLDDAFEIRVDDYLAPKGGVIFPNPNAPTGRLLALGEIERLLAANRD HHHHHHHHHHHCCCCCCCEEEEECCEECCCCCEEECCCCCCCCCEEEHHHHHHHHHCCCC SVVVIDEAYVDFGGDSAVPLVARHPQLLVTRTLSKSHALAGLRVGYAVGQAPLIEALNRV CEEEEEEHEEECCCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KDSFNSYPLDRFAQAGALASIEDRAYFESICARVIATRTRLVDAMESLGFEVLPSAANFI HHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHEE FARHPAHDGEALAARLRERSIIVRHFKNPARIAPFLRITVGTDAQCDALVDALKALC EEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA