| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is hisE
Identifier: 74317724
GI number: 74317724
Start: 1795831
End: 1796157
Strand: Reverse
Name: hisE
Synonym: Tbd_1706
Alternate gene names: 74317724
Gene position: 1796157-1795831 (Counterclockwise)
Preceding gene: 74317725
Following gene: 74317723
Centisome position: 61.73
GC content: 63.0
Gene sequence:
>327_bases ATGAGCGATATCCTCGACCGCCTGGCGGAAATCCTCGAGGCGCGCAAGCAGGCCTCGCCGGACGCTTCCTACGTCGCCCG ACTCTATGCCAAGGGCACCGACGCGATCCTCAAGAAGATCGGCGAGGAGGCAACCGAAACCGTGATGGCCGCGAAGGACG ACCAGGCGGAAAAGATCATCTACGAGGTCGCGGATTTGTGGTTCCATACGCTCGTACTGCTCGCGCACAAGGGCCTCAAG CCGGCGGACGTGCTCGAGGAACTGGCGCGCCGCGAGGGGCTTTCGGGGCTGACGGAAAAAGCGAACCGGCAAGGTGGATC GACATGA
Upstream 100 bases:
>100_bases GCTCGTGTTTCTTCCACAAGCTCACGACCGATGATCGGGGCCACGCGGACTGGGTGGCGACCGAGCCGGTGTTGAAGAAT CCTGACGAGATCTACCGCAG
Downstream 100 bases:
>100_bases GTGACTGCATCTTCTGCAAGATCGTCCGAGGCGAACTGCCCGCCAGCAAGGTCTATGAAGACGAGGAATTACTCGCCTTC CACGACATCCATCCGTTTGC
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSDILDRLAEILEARKQASPDASYVARLYAKGTDAILKKIGEEATETVMAAKDDQAEKIIYEVADLWFHTLVLLAHKGLK PADVLEELARREGLSGLTEKANRQGGST
Sequences:
>Translated_108_residues MSDILDRLAEILEARKQASPDASYVARLYAKGTDAILKKIGEEATETVMAAKDDQAEKIIYEVADLWFHTLVLLAHKGLK PADVLEELARREGLSGLTEKANRQGGST >Mature_107_residues SDILDRLAEILEARKQASPDASYVARLYAKGTDAILKKIGEEATETVMAAKDDQAEKIIYEVADLWFHTLVLLAHKGLKP ADVLEELARREGLSGLTEKANRQGGST
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=88, Percent_Identity=43.1818181818182, Blast_Score=72, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_THIDA (Q3SI69)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315464.1 - ProteinModelPortal: Q3SI69 - SMR: Q3SI69 - STRING: Q3SI69 - GeneID: 3671289 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1706 - NMPDR: fig|292415.3.peg.1803 - eggNOG: COG0140 - HOGENOM: HBG646527 - OMA: ETVMAAK - ProtClustDB: PRK00400 - BioCyc: TDEN292415:TBD_1706-MONOMER - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 11840; Mature: 11708
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDILDRLAEILEARKQASPDASYVARLYAKGTDAILKKIGEEATETVMAAKDDQAEKII CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH YEVADLWFHTLVLLAHKGLKPADVLEELARREGLSGLTEKANRQGGST HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure SDILDRLAEILEARKQASPDASYVARLYAKGTDAILKKIGEEATETVMAAKDDQAEKII HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH YEVADLWFHTLVLLAHKGLKPADVLEELARREGLSGLTEKANRQGGST HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA