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The map label for this gene is traA [H]

Identifier: 74317704

GI number: 74317704

Start: 1773424

End: 1776147

Strand: Reverse

Name: traA [H]

Synonym: Tbd_1686

Alternate gene names: 74317704

Gene position: 1776147-1773424 (Counterclockwise)

Preceding gene: 74317705

Following gene: 74317703

Centisome position: 61.04

GC content: 60.94

Gene sequence:

>2724_bases
ATGCTATCAGTTTCAGTCATTGGTGCCGGCAGCGAAGCTGCTGGCTATGCCGCCTATCAAGAAAATGAAGTCGCTGCGGC
GCAGCGTGAGGACTACTACGCAGGGGAAGGCGACGTTGGCCGCTGGGTAGGTAAAGCGGCGCAGGAAATGAGTCTGGCGG
GCGAACTTAAGCCAGGCCAACTGCTGGCCGGCCTACAGGGATTCCACCCCGAAACCGGCGAGGCGCTGTCGAAAAACGCG
GGCGAGAAACATAAAGGCGGCTGGGACCTGACGTTCTCGGCTCCGAAATCGGTCTCTTGTGTCTGGGCCGTGGCCGATCC
TGAAACACGCGGCGCAATTGAAGACGCACAGAATGCCGCCGCAGCACGAGCCCTGCAATTCCTGGAAGAATCCGGCGCGT
TCACCTCACGCAGCCGGAACGAGCCAGGCCCCGTGGAAGGGGTGGCCGCCGCTATGTATCAGCATGGCACGAGCCGCGAA
GCGGATCCTCAGCTTCACACCCACGTTGCCGTCCTCAACGTGCAACCAGACGGCACCGCGATGGATTTCGACACCCGCTG
GAAGATGGCCGCGGGCGCGGTTTACCGGGCCGAGCTGGCTGCCGAAATGCAGAAGCTGGGCTTGCGCGTCGAAGCAGACG
GCAAGAGCTTCCGCGTCGTTGACGTGCCGGCAGCGGTCGAGAAAGAGTTCTCGACCCGCCGCGGGCAGATCGAGGAAGCC
CTTGCCGCCAAGGGCTTGAAGTCAGCCAAGGCCGCCGAAGTAGCCGCCCTGTCCACCAGGAAGGGAAAGGAGCCGACTAC
GCGAGATGAGCTCTTTGCCGACTGGAAAACCCGCGCCGCCGAGCACGGATTTAGCCTGGAATCGATCCAGGCCTTGCGCA
ATGCGCCGCGTCAGCAGGCCGAGGAACTCGACCTCGACGAGATCCTCGGCAAACTGACAGAACAGGCCTCCACCTTCACC
CCTCAGCAGTTGGCCGCAGCCGTGGCTGTCGAGATGCAGGGCAGGGGCGGCGCGGATGCAATCCAGAAAGCGTTACGCGA
CCTGACAAAACATCCCGACCTCGTCCGTCTCGAATCCGACAAGCCGCGCCACCTCATGCGCGGCGAGCCGACCGAGACCC
GTTACACCACGCGCGAAATGCTCGGAATCGAGCAAGGCATTCTCGACAAGTCCATGGCCCGCCAGACCGACATGAGTCAT
CGAGCCGATATCGCCGCTGCCATCGCAGCGCGTCCGACAATGACGGACGAACAGAAAGCTGCGCTCAAGCATGTCTGCGA
AGATCCGGGCGCGGTCAAAATCATCGAGGGTATGGCCGGCACCGGCAAGTCATATCTCATGGATGCGGCGCGCGAATCGT
GGGAAGCGGCAGGCTTCGAGGTGGAGGGAGCAGCCTTAGCAGGTAAGGCCGCCTCTGGCTTGGAAAGTGGCGCTGACATC
AATTCGAAAACGATCCACTCGCTGCTCTTCCAGCTCGACAGCGGCCAGCGCCAACTTCATAGCAAATCAATCCTCGTGAT
CGACGAGGGCGGGATGGTGGGAAGCCGTCAGCTCGCGCGTGTGCTGGACCACGTCCACAAGGCCGGCGCCAAGGCTGTGA
TGGTGGGTGACTCATGGCAGCTCCAACCGATCGACGCCGGCGGCGCGTTCCGCCTTCTCTCCGAACGATTGGGCTCGGCC
CGGTTAGAAAACATCGTTCGTCAAAAACATGAGGTAGATCGTCGGGTCGTGCGCCTTTTTGCGGATGGCAAAGCCGCCGA
GGCCCTTGAGTCAATGCGCGAACGCGGGCTTCTCAAGACCGCTGAAACCCGGGCGCAGGCCATGCAGGAGATGGTGCGCG
ATTGGGCGCAGGCACGCGATCCATCCAAGCCTGGTGAGTCGATCATGTTGGCCGCCACTCGCTCCGAGGTTGCACATCTC
AACAACTCAGCTCGCCAGATTTTGAAAGCCGAAGGGCGCTTGGCTGGTGGATTGCAGGTGCCAACCGCCGGTGGAATGAA
GGAGTTTGCCGTTGGTGACCGGATCATTTTTGGGAAAAATAATTCTGTCTTTGGAGTAAAAAACGGCGAGCTCGGCACGG
TTGAATCCGTGCGTTTCAACAAGACGGGGCAGGTGGAAATAACCGCGCGCCATGACAACGGCAAGGCGGTCAAATTCACA
GTCGGTGAGGAAAAGGGCCAATTTGAGGTTTTCGATTATGGCTACGCCATGACCGTCCACAAGGCGCAGGGCGTGACCGT
TGATCGCGCCTTTGTTCTTCCTTCCGATTCGATGTCGTCGAGGGAATGGACCTACGTCGCCATGTCACGCCATCGCCTTG
AGGCGCGGATGTACATCACGCGCGATTCAGTTGAGGCCCTCACCAAGACAATGAGCCGGGCGCAAGGCAAAGAAACCAGC
CTGGACTTCAAGCTTGCCGCCACCTCGGAAAAAACCGACGCGCCAGAATCGACTACAAGCCTCGATCGCGAGGCGACCGA
AGCCAGCACCTCGACCCAAAAAGAAAACGCGCCGCAAGCCCTCGACGCCGTCTCGGTCTCGCGCCACGTCGCGGACAAGG
CTGTCGATTCCGCCGGCCTCAGCGACAAACAGAAACACCAGGTCAACAAAGTGCTGGACGTCGCCGAGCTCGCCGCGCAC
ATCAAAACCGGCAACCTGGCGGGCGCCGTCAGGAAGGCCGAAGACGTTCAAAAACACATTCACGACGAGGGCCTCGCACC
ATGA

Upstream 100 bases:

>100_bases
CCGAGGTATTACCAGTAACGGAGGCCGGGGTTCAGCCTCCACGAAAGAAAAAAATCCGCCTAAAGAAATCCGCCACAGCC
CAGCTTGAGGAGAGTATCTG

Downstream 100 bases:

>100_bases
ACAAATCCGCTGCGCTTCTCCATGTTCTCGCCGGCCTGGCCGTGTCCGGCTTGGCGCTGGCCGCGCCTGATCCAGCCTCG
ATGCTGGCCGCCGCTGAAGG

Product: putative ATP-dependent exoDNAse (exonuclease V) subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 907; Mature: 907

Protein sequence:

>907_residues
MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQLLAGLQGFHPETGEALSKNA
GEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNAAAARALQFLEESGAFTSRSRNEPGPVEGVAAAMYQHGTSRE
ADPQLHTHVAVLNVQPDGTAMDFDTRWKMAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVPAAVEKEFSTRRGQIEEA
LAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQAEELDLDEILGKLTEQASTFT
PQQLAAAVAVEMQGRGGADAIQKALRDLTKHPDLVRLESDKPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSH
RADIAAAIAARPTMTDEQKAALKHVCEDPGAVKIIEGMAGTGKSYLMDAARESWEAAGFEVEGAALAGKAASGLESGADI
NSKTIHSLLFQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQPIDAGGAFRLLSERLGSA
RLENIVRQKHEVDRRVVRLFADGKAAEALESMRERGLLKTAETRAQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHL
NNSARQILKAEGRLAGGLQVPTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFNKTGQVEITARHDNGKAVKFT
VGEEKGQFEVFDYGYAMTVHKAQGVTVDRAFVLPSDSMSSREWTYVAMSRHRLEARMYITRDSVEALTKTMSRAQGKETS
LDFKLAATSEKTDAPESTTSLDREATEASTSTQKENAPQALDAVSVSRHVADKAVDSAGLSDKQKHQVNKVLDVAELAAH
IKTGNLAGAVRKAEDVQKHIHDEGLAP

Sequences:

>Translated_907_residues
MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQLLAGLQGFHPETGEALSKNA
GEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNAAAARALQFLEESGAFTSRSRNEPGPVEGVAAAMYQHGTSRE
ADPQLHTHVAVLNVQPDGTAMDFDTRWKMAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVPAAVEKEFSTRRGQIEEA
LAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQAEELDLDEILGKLTEQASTFT
PQQLAAAVAVEMQGRGGADAIQKALRDLTKHPDLVRLESDKPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSH
RADIAAAIAARPTMTDEQKAALKHVCEDPGAVKIIEGMAGTGKSYLMDAARESWEAAGFEVEGAALAGKAASGLESGADI
NSKTIHSLLFQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQPIDAGGAFRLLSERLGSA
RLENIVRQKHEVDRRVVRLFADGKAAEALESMRERGLLKTAETRAQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHL
NNSARQILKAEGRLAGGLQVPTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFNKTGQVEITARHDNGKAVKFT
VGEEKGQFEVFDYGYAMTVHKAQGVTVDRAFVLPSDSMSSREWTYVAMSRHRLEARMYITRDSVEALTKTMSRAQGKETS
LDFKLAATSEKTDAPESTTSLDREATEASTSTQKENAPQALDAVSVSRHVADKAVDSAGLSDKQKHQVNKVLDVAELAAH
IKTGNLAGAVRKAEDVQKHIHDEGLAP
>Mature_907_residues
MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQLLAGLQGFHPETGEALSKNA
GEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNAAAARALQFLEESGAFTSRSRNEPGPVEGVAAAMYQHGTSRE
ADPQLHTHVAVLNVQPDGTAMDFDTRWKMAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVPAAVEKEFSTRRGQIEEA
LAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQAEELDLDEILGKLTEQASTFT
PQQLAAAVAVEMQGRGGADAIQKALRDLTKHPDLVRLESDKPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSH
RADIAAAIAARPTMTDEQKAALKHVCEDPGAVKIIEGMAGTGKSYLMDAARESWEAAGFEVEGAALAGKAASGLESGADI
NSKTIHSLLFQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQPIDAGGAFRLLSERLGSA
RLENIVRQKHEVDRRVVRLFADGKAAEALESMRERGLLKTAETRAQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHL
NNSARQILKAEGRLAGGLQVPTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFNKTGQVEITARHDNGKAVKFT
VGEEKGQFEVFDYGYAMTVHKAQGVTVDRAFVLPSDSMSSREWTYVAMSRHRLEARMYITRDSVEALTKTMSRAQGKETS
LDFKLAATSEKTDAPESTTSLDREATEASTSTQKENAPQALDAVSVSRHVADKAVDSAGLSDKQKHQVNKVLDVAELAAH
IKTGNLAGAVRKAEDVQKHIHDEGLAP

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 97730; Mature: 97730

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS01034 GLYCOSYL_HYDROL_F16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQ
CEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
LLAGLQGFHPETGEALSKNAGEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNAA
HHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHH
AARALQFLEESGAFTSRSRNEPGPVEGVAAAMYQHGTSREADPQLHTHVAVLNVQPDGTA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCE
MDFDTRWKMAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVPAAVEKEFSTRRGQIEEA
ECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
LAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQA
HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
EELDLDEILGKLTEQASTFTPQQLAAAVAVEMQGRGGADAIQKALRDLTKHPDLVRLESD
HHCCHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCEEEECCC
KPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSHRADIAAAIAARPTMTDEQKA
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
ALKHVCEDPGAVKIIEGMAGTGKSYLMDAARESWEAAGFEVEGAALAGKAASGLESGADI
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCHHHCCHHHHCCCCCCCC
NSKTIHSLLFQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQ
CHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCEE
LQPIDAGGAFRLLSERLGSARLENIVRQKHEVDRRVVRLFADGKAAEALESMRERGLLKT
EEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
AETRAQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHLNNSARQILKAEGRLAGGLQV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEC
PTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFNKTGQVEITARHDNGKAVKFT
CCCCCCHHHCCCCEEEECCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEE
VGEEKGQFEVFDYGYAMTVHKAQGVTVDRAFVLPSDSMSSREWTYVAMSRHRLEARMYIT
ECCCCCCEEEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHCEEEEEEE
RDSVEALTKTMSRAQGKETSLDFKLAATSEKTDAPESTTSLDREATEASTSTQKENAPQA
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
LDAVSVSRHVADKAVDSAGLSDKQKHQVNKVLDVAELAAHIKTGNLAGAVRKAEDVQKHI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HDEGLAP
HHCCCCC
>Mature Secondary Structure
MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQ
CEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
LLAGLQGFHPETGEALSKNAGEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNAA
HHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHH
AARALQFLEESGAFTSRSRNEPGPVEGVAAAMYQHGTSREADPQLHTHVAVLNVQPDGTA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCE
MDFDTRWKMAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVPAAVEKEFSTRRGQIEEA
ECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH
LAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQA
HHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
EELDLDEILGKLTEQASTFTPQQLAAAVAVEMQGRGGADAIQKALRDLTKHPDLVRLESD
HHCCHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCEEEECCC
KPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSHRADIAAAIAARPTMTDEQKA
CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
ALKHVCEDPGAVKIIEGMAGTGKSYLMDAARESWEAAGFEVEGAALAGKAASGLESGADI
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCHHHCCHHHHCCCCCCCC
NSKTIHSLLFQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQ
CHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCEE
LQPIDAGGAFRLLSERLGSARLENIVRQKHEVDRRVVRLFADGKAAEALESMRERGLLKT
EEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH
AETRAQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHLNNSARQILKAEGRLAGGLQV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEC
PTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFNKTGQVEITARHDNGKAVKFT
CCCCCCHHHCCCCEEEECCCCCEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEE
VGEEKGQFEVFDYGYAMTVHKAQGVTVDRAFVLPSDSMSSREWTYVAMSRHRLEARMYIT
ECCCCCCEEEEECCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHCEEEEEEE
RDSVEALTKTMSRAQGKETSLDFKLAATSEKTDAPESTTSLDREATEASTSTQKENAPQA
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHH
LDAVSVSRHVADKAVDSAGLSDKQKHQVNKVLDVAELAAHIKTGNLAGAVRKAEDVQKHI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HDEGLAP
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]