| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317673
Identifier: 74317673
GI number: 74317673
Start: 1737689
End: 1738066
Strand: Reverse
Name: 74317673
Synonym: Tbd_1655
Alternate gene names: NA
Gene position: 1738066-1737689 (Counterclockwise)
Preceding gene: 74317678
Following gene: 74317672
Centisome position: 59.73
GC content: 65.34
Gene sequence:
>378_bases ATGAACACCTCGTTTGCTGTCTCCCTCGCTGCGCTAGGCATGCTGGTCGCCTGTGCCAGCCCGTATGCTGCGCCGCCCGT CAAGAGCCAGAGCGGCGTCCTCACCGACCCGGCCGGCATGACGCTGTATGCATTCGACAAGGACACGGCCGGCTCGGGCA AGAGCATGTGCAACGGCGGCTGTGCTGAAAAATGGCCCCCGCTGGCGGCCGGCGCGTCCGATCGCGCAAGTGGCGACTAC GCGATCATCAGCCGCGACGACGGCTCGAAGCAGTGGGCCTATAAGGGCAAGCCGCTTTACCTGTGGAGCAAGGACGTCAA GCCGGGCGACACGACCGGCGACGGGGTCAACAACGTCTGGCATGCCGTCAAACCCTGA
Upstream 100 bases:
>100_bases CAGGCTGGGTCCCGACGGGAATAAACTCCGCCCTCAAGGTGTTCACGTCGATGCAAGGCTGACTTGCATCCAGTTCTTCC ACTCCAAGAAAGGATATGCC
Downstream 100 bases:
>100_bases GTGCGTGCCCGTTCCGACCTGATCGAGCACTTGCCCCGTCTCCGCCGGTACGCGCGGGCGTTGACGGGCGACGCCAGTCG CGCCGACGACCTCGTGCAGG
Product: transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Adhesion Lipoprotein; Exported Lipoprotein; Secreted Protein; Exported Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MNTSFAVSLAALGMLVACASPYAAPPVKSQSGVLTDPAGMTLYAFDKDTAGSGKSMCNGGCAEKWPPLAAGASDRASGDY AIISRDDGSKQWAYKGKPLYLWSKDVKPGDTTGDGVNNVWHAVKP
Sequences:
>Translated_125_residues MNTSFAVSLAALGMLVACASPYAAPPVKSQSGVLTDPAGMTLYAFDKDTAGSGKSMCNGGCAEKWPPLAAGASDRASGDY AIISRDDGSKQWAYKGKPLYLWSKDVKPGDTTGDGVNNVWHAVKP >Mature_125_residues MNTSFAVSLAALGMLVACASPYAAPPVKSQSGVLTDPAGMTLYAFDKDTAGSGKSMCNGGCAEKWPPLAAGASDRASGDY AIISRDDGSKQWAYKGKPLYLWSKDVKPGDTTGDGVNNVWHAVKP
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12960; Mature: 12960
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSFAVSLAALGMLVACASPYAAPPVKSQSGVLTDPAGMTLYAFDKDTAGSGKSMCNGG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCC CAEKWPPLAAGASDRASGDYAIISRDDGSKQWAYKGKPLYLWSKDVKPGDTTGDGVNNVW CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCE HAVKP ECCCC >Mature Secondary Structure MNTSFAVSLAALGMLVACASPYAAPPVKSQSGVLTDPAGMTLYAFDKDTAGSGKSMCNGG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCC CAEKWPPLAAGASDRASGDYAIISRDDGSKQWAYKGKPLYLWSKDVKPGDTTGDGVNNVW CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCCE HAVKP ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA