| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317671
Identifier: 74317671
GI number: 74317671
Start: 1736433
End: 1737194
Strand: Reverse
Name: 74317671
Synonym: Tbd_1653
Alternate gene names: NA
Gene position: 1737194-1736433 (Counterclockwise)
Preceding gene: 74317672
Following gene: 74317670
Centisome position: 59.7
GC content: 70.21
Gene sequence:
>762_bases ATGAACGAAAACGTGCGTGAAGACGAACTTCATGCCTATGTGGACGGCGCGCTGGACGAGGCGCGCCGTCTCGAGGTCGA GGCGTGGCTTGCCGCGCATCCGGCCGACGCGGCGCGGGTCGCGGCATGGACCGCGCAGAGCAGGATGATGCACGACGCAT TCGACTCCGTGCTCAACGAGCCCCTGCCGCTGAACCTGGTGCGTGCCACGCGGCGGCCGGCGTTCGCTGCGCCTGCCCGC GCCGTGGCCGCGTCGCTGGCCCTGCTCGCAGCCGGCCTCGTCGGCTACGCATTCGGTGTGGCCGGCCAAGGCCAGCCGAC CCGGGCGCCGGCGTATCTGGCCCGCGACGCGGCCATCGCCCACGCCGTGTTCAGCCCGGAAACGCGCCATCCGGTGGAAG TCGACGCTGCGCAGGGCGCGCATCTGGTCGCGTGGCTATCCAAGCGGGTCGGAACGCCCCTGCAGGCGCCGGACTTCAGC GCGCAAGGTTTCAGTCTGCTCGGCGGACGGCTGCTCTCGGGCGACACCGGGCCCGTCGCGCAGTTCATGTACGAGGACGG TCTGGGACGCCGGGTGACCCTGTATGTGCGCCGCGCGGCCGCTGACGCCCCCGGGCCTACGGCCTTCCGTCATGCCGTCG AAAAAGGCGTCGACGTGTTCTACTGGATCGACGGCGAGTTCGGTTATGCGCTGTCAGGCCAGATCGGCCGTCAGACCATG CAGCGTCTGGCGGTTGCGGCCTACGGGCAGTTGACCCCCTGA
Upstream 100 bases:
>100_bases GGGTGCCGACCGGTACCGTGATGTCACGTCTGGCGCGGGCGCGCGAACGCATGCGCCGGATGCTCACGGGCGAACCCGTC GTCAATCTGAAAGCCGTGAA
Downstream 100 bases:
>100_bases GCCACCGCGCCTCAGTATCCGCGGGCGAGAGCTTTCCTGTTGTCCGCACCGCTTTCCGCCGCAGCGCGTCGCAACGGTCC GGTGATTCGATCGCAGCCGG
Product: transmembrane transcriptional regulator (anti-sigma factor)
Products: NA
Alternate protein names: Transmembrane Transcriptional Regulator; Anti-Sigma Factor; Transmembrane Regulator; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Sigma Factor Regulator PrtR; Transmembrane Regulator PrtR; Transmembrane Transcription Regulator
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNEPLPLNLVRATRRPAFAAPAR AVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFS AQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM QRLAVAAYGQLTP
Sequences:
>Translated_253_residues MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNEPLPLNLVRATRRPAFAAPAR AVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFS AQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM QRLAVAAYGQLTP >Mature_253_residues MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNEPLPLNLVRATRRPAFAAPAR AVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIAHAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFS AQGFSLLGGRLLSGDTGPVAQFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM QRLAVAAYGQLTP
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27030; Mature: 27030
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PLPLNLVRATRRPAFAAPARAVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIA CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFSAQGFSLLGGRLLSGDTGPVA HHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEECCCCCHHH QFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM HHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCEEECCHHHHHHH QRLAVAAYGQLTP HHHHHHHHCCCCC >Mature Secondary Structure MNENVREDELHAYVDGALDEARRLEVEAWLAAHPADAARVAAWTAQSRMMHDAFDSVLNE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PLPLNLVRATRRPAFAAPARAVAASLALLAAGLVGYAFGVAGQGQPTRAPAYLARDAAIA CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH HAVFSPETRHPVEVDAAQGAHLVAWLSKRVGTPLQAPDFSAQGFSLLGGRLLSGDTGPVA HHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEECCCCCHHH QFMYEDGLGRRVTLYVRRAAADAPGPTAFRHAVEKGVDVFYWIDGEFGYALSGQIGRQTM HHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCEEECCHHHHHHH QRLAVAAYGQLTP HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA