| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is hsaB [H]
Identifier: 74317661
GI number: 74317661
Start: 1727237
End: 1727749
Strand: Reverse
Name: hsaB [H]
Synonym: Tbd_1643
Alternate gene names: 74317661
Gene position: 1727749-1727237 (Counterclockwise)
Preceding gene: 74317662
Following gene: 161899033
Centisome position: 59.38
GC content: 65.11
Gene sequence:
>513_bases GTGAGCCTTGAGAATCCTGTCAAACGCCTGTTCATGACGCTCACCCAGGGTGTCTACGTCGTCGGCGTCGTCGACGACGG ACGGTATAACGCCTTCACGGCGTCGTCGGTCATGCAGGTGTCGCTGCAGCCGCCGATGCTCGCGCTTGCCGTCAATCCGG GCAACGCGTCCTACCCGCTGCTGATCGCGGGCGGCATCTTTGCGGTGACGGTGCTGCAGAGCGATCAAGCGGCGCTCGCC GATCGTTTCGGCAATCTCAGCGCGAAGGACGACGACAAGCTCGCCGGCGTCGCATGGCACGACTCGGTATCGGGCGCGCC TGTGCTCGACGAAGGCTTGTCCTACTTCGACTGCCGGGTGATCAGCAAGCTGCCGGCCGGCGATCACGTGGTGATCCTGG CCGAGGTGACGGGCGGGGAGTTTCTGCAGCCACGGGGGAGGCCGCTTCGCTACGACGAACTCGGCGACCTCGACGGCAGC AACGAACTCCTTCCCGACCGATTGGGCGACTAG
Upstream 100 bases:
>100_bases ACACGCGCTTTGATTGCCGTTCGACGTCGCGCGCGGCGTGAACCCGCGGTCCGGCGAACGCCGATGCGGCGTGAGTTTTC CATCCAGCGGGGGAGCGGCC
Downstream 100 bases:
>100_bases CACGCCCCGAGGTGTTCACTGGGGAGTGCCGCCGGCGACTCGCGTACGACCGCCGTCCCAAGCTCAGCGGTCGGTGGCCG CCTGATCGTCGCTCCCCTGG
Product: flavin reductase-like protein
Products: NAD(+); reduced flavin [C]
Alternate protein names: Flavin:NADH reductase [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSLENPVKRLFMTLTQGVYVVGVVDDGRYNAFTASSVMQVSLQPPMLALAVNPGNASYPLLIAGGIFAVTVLQSDQAALA DRFGNLSAKDDDKLAGVAWHDSVSGAPVLDEGLSYFDCRVISKLPAGDHVVILAEVTGGEFLQPRGRPLRYDELGDLDGS NELLPDRLGD
Sequences:
>Translated_170_residues MSLENPVKRLFMTLTQGVYVVGVVDDGRYNAFTASSVMQVSLQPPMLALAVNPGNASYPLLIAGGIFAVTVLQSDQAALA DRFGNLSAKDDDKLAGVAWHDSVSGAPVLDEGLSYFDCRVISKLPAGDHVVILAEVTGGEFLQPRGRPLRYDELGDLDGS NELLPDRLGD >Mature_169_residues SLENPVKRLFMTLTQGVYVVGVVDDGRYNAFTASSVMQVSLQPPMLALAVNPGNASYPLLIAGGIFAVTVLQSDQAALAD RFGNLSAKDDDKLAGVAWHDSVSGAPVLDEGLSYFDCRVISKLPAGDHVVILAEVTGGEFLQPRGRPLRYDELGDLDGSN ELLPDRLGD
Specific function: Catalyzes the reduction of free flavins (FMN or FAD) by NADH. Subsequently, the reduced flavins diffuse to the HsaA oxygenase subunit [H]
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the non-flavoprotein flavin reductase family [H]
Homologues:
Organism=Escherichia coli, GI87081819, Length=105, Percent_Identity=30.4761904761905, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: 1.6.8.- [C]
Molecular weight: Translated: 18106; Mature: 17975
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLENPVKRLFMTLTQGVYVVGVVDDGRYNAFTASSVMQVSLQPPMLALAVNPGNASYPL CCCCHHHHHHHHHHHCCEEEEEEEECCCCCEEECCCEEEEECCCCEEEEEECCCCCCCCE LIAGGIFAVTVLQSDQAALADRFGNLSAKDDDKLAGVAWHDSVSGAPVLDEGLSYFDCRV EEECCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEE ISKLPAGDHVVILAEVTGGEFLQPRGRPLRYDELGDLDGSNELLPDRLGD ECCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLENPVKRLFMTLTQGVYVVGVVDDGRYNAFTASSVMQVSLQPPMLALAVNPGNASYPL CCCHHHHHHHHHHHCCEEEEEEEECCCCCEEECCCEEEEECCCCEEEEEECCCCCCCCE LIAGGIFAVTVLQSDQAALADRFGNLSAKDDDKLAGVAWHDSVSGAPVLDEGLSYFDCRV EEECCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCEEEEEE ISKLPAGDHVVILAEVTGGEFLQPRGRPLRYDELGDLDGSNELLPDRLGD ECCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; flavin [C]
Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA