| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is flgB [H]
Identifier: 74317655
GI number: 74317655
Start: 1722429
End: 1722830
Strand: Reverse
Name: flgB [H]
Synonym: Tbd_1637
Alternate gene names: 74317655
Gene position: 1722830-1722429 (Counterclockwise)
Preceding gene: 161899033
Following gene: 74317654
Centisome position: 59.21
GC content: 65.67
Gene sequence:
>402_bases ATGCTGAACCGGCTCGACGAGATGTTGAATTTCCATACCCAGGCGCTGCGCGTCCGCGACCAGCGCCAGCAGGTATTGGC GTCCAATATCGCCAACGCCGACACGCCGCATTACAAGGCGCGCGACCTCGATTTCAAGACTGCGCTGCAAGGTGCGCTGC AGGGTACGCAGACGGGCGGTACGGCGCTCGCGACGACGGCGCCGGGTCACCTGGCAGGCAAGGCCGGCGGCTCCGACGCG GGGCTGCTATATCGTACCCCGGCGCAGGGCAGCGTCGACGGCAACACGGTCGACGTCGACGCCGAGCGTGCGGCGTTCGC CGAAAACGCGATCCAGTACGAGTTCAACCTGACCCGGCTCAACCAGCAGATCAAGGGCCTTCTGGCCGCGATCCAGGGAT AA
Upstream 100 bases:
>100_bases GAGGGGCCTTTTTGCCGCTTATCGTTAGATTGGATGGACAGGGGCGTGTCTAGGATGCAGTCATCGTAAAAGGGCCTGCG GCCCGGATGAGGGGACGACC
Downstream 100 bases:
>100_bases GGAGGCGTCATGTCCCTCTTCAACATCTTCAACGTCGCCGGCTCGGCGATGAACGCCCAGTCGCAGCGGCTCAACACCGT CGCCAGCAATCTCGCCAACG
Product: flagellar basal-body rod protein FlgB
Products: NA
Alternate protein names: Putative proximal rod protein [H]
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLNRLDEMLNFHTQALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGGTALATTAPGHLAGKAGGSDA GLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRLNQQIKGLLAAIQG
Sequences:
>Translated_133_residues MLNRLDEMLNFHTQALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGGTALATTAPGHLAGKAGGSDA GLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRLNQQIKGLLAAIQG >Mature_133_residues MLNRLDEMLNFHTQALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGGTALATTAPGHLAGKAGGSDA GLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRLNQQIKGLLAAIQG
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787313, Length=136, Percent_Identity=47.7941176470588, Blast_Score=124, Evalue=3e-30,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR006300 [H]
Pfam domain/function: PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 14193; Mature: 14193
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRLDEMLNFHTQALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC TALATTAPGHLAGKAGGSDAGLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRL EEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHEEEEHHHHHH NQQIKGLLAAIQG HHHHHHHHHHHCC >Mature Secondary Structure MLNRLDEMLNFHTQALRVRDQRQQVLASNIANADTPHYKARDLDFKTALQGALQGTQTGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC TALATTAPGHLAGKAGGSDAGLLYRTPAQGSVDGNTVDVDAERAAFAENAIQYEFNLTRL EEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHEEEEHHHHHH NQQIKGLLAAIQG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2129540; 2404955; 11677609; 8200538; 2181149 [H]