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The map label for this gene is fliR [H]

Identifier: 74317630

GI number: 74317630

Start: 1694976

End: 1695764

Strand: Direct

Name: fliR [H]

Synonym: Tbd_1612

Alternate gene names: 74317630

Gene position: 1694976-1695764 (Clockwise)

Preceding gene: 74317629

Following gene: 74317656

Centisome position: 58.25

GC content: 64.64

Gene sequence:

>789_bases
ATGATCAGCCTTACCGACGCGCAGCTCAACGTCTGGCTGATCAGTTTCATCTGGCCGCTCACGCGCATACTCGGCCTCGT
CATGGTGGCGCCGGTGTTTGGCCACCGCGCCGTTCCGGGCCGGGTCAAGATCGGCCTCGGCATCTTCATCGCGCTGATCG
CGGCGCCTACACTGCCGCCGATGCCTGCGGTCGGGCTAGGTTCCTGGCACGGCCTGTTCATCCTGGTCCAGCAGTTTCTG
ATCGGCGTCGCCATCGGCTTCATCATGCGCATCGTGTTCGCGGCCGTCGAAGCCGCTGGCGAAATCATCGGCCTGCAGAT
GGGTCTCGGCTTCGCGTCGTTCTTCGATCCGCAAAGCGCAGGCCAGACCCTCGTGCTCGCGCGCTTCTTCAACATGCTCG
CCGTGCTGCTGATGCTTGCGGTCAACGCACATCTACTGCTCCTCGGCGTCCTCGTCGAGAGCTTCCAGATCCTGCCGATC
AGCCACGAGCCGCTCGCCGCGGCGGGATTCCGCAACGTCGCGGCGTTCGGTACGACGATCTTCTCGCTCGGCCTGCAACT
CGCGCTGCCGCTGATCGCGATCCTGCTAATGACCAACCTCACGCTGGGCATCCTCACCCGCTCCGCGCCGCAACTCAACA
TCTTCGCGATCGGTTTTCCGATCACGCTGGGCGTCGGCCTGATCATGCTCGACGTGACCCTGCCCTACTTCGCGCCGCAG
TTCGAACAGCTGATCGCGAGCGGGCTGGACGCCGCGACGAGCGTCGTCCGCACCCTGCGTCCTCACTAG

Upstream 100 bases:

>100_bases
CGGCGGCAGACGCCCGGCGGCGCGCGCGGCCGAGGCGCCCGGGTTTGGCTCGCCTTCTCCCGCCCTCGCCGCCGCATGTC
GCCACCGCAGGCGCGCCGCG

Downstream 100 bases:

>100_bases
GCGCCACGGAAAAGGGTTGAAACAAGGGTGTAGCGAGACACGCGAGGCAAGCCTCGCGCCGAAGGACGGCTCAGAAGCCG
AGGCTGTCGAGAAGGTCGTC

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MISLTDAQLNVWLISFIWPLTRILGLVMVAPVFGHRAVPGRVKIGLGIFIALIAAPTLPPMPAVGLGSWHGLFILVQQFL
IGVAIGFIMRIVFAAVEAAGEIIGLQMGLGFASFFDPQSAGQTLVLARFFNMLAVLLMLAVNAHLLLLGVLVESFQILPI
SHEPLAAAGFRNVAAFGTTIFSLGLQLALPLIAILLMTNLTLGILTRSAPQLNIFAIGFPITLGVGLIMLDVTLPYFAPQ
FEQLIASGLDAATSVVRTLRPH

Sequences:

>Translated_262_residues
MISLTDAQLNVWLISFIWPLTRILGLVMVAPVFGHRAVPGRVKIGLGIFIALIAAPTLPPMPAVGLGSWHGLFILVQQFL
IGVAIGFIMRIVFAAVEAAGEIIGLQMGLGFASFFDPQSAGQTLVLARFFNMLAVLLMLAVNAHLLLLGVLVESFQILPI
SHEPLAAAGFRNVAAFGTTIFSLGLQLALPLIAILLMTNLTLGILTRSAPQLNIFAIGFPITLGVGLIMLDVTLPYFAPQ
FEQLIASGLDAATSVVRTLRPH
>Mature_262_residues
MISLTDAQLNVWLISFIWPLTRILGLVMVAPVFGHRAVPGRVKIGLGIFIALIAAPTLPPMPAVGLGSWHGLFILVQQFL
IGVAIGFIMRIVFAAVEAAGEIIGLQMGLGFASFFDPQSAGQTLVLARFFNMLAVLLMLAVNAHLLLLGVLVESFQILPI
SHEPLAAAGFRNVAAFGTTIFSLGLQLALPLIAILLMTNLTLGILTRSAPQLNIFAIGFPITLGVGLIMLDVTLPYFAPQ
FEQLIASGLDAATSVVRTLRPH

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=259, Percent_Identity=47.4903474903475, Blast_Score=188, Evalue=3e-49,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27912; Mature: 27912

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLTDAQLNVWLISFIWPLTRILGLVMVAPVFGHRAVPGRVKIGLGIFIALIAAPTLPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCC
MPAVGLGSWHGLFILVQQFLIGVAIGFIMRIVFAAVEAAGEIIGLQMGLGFASFFDPQSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
GQTLVLARFFNMLAVLLMLAVNAHLLLLGVLVESFQILPISHEPLAAAGFRNVAAFGTTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
FSLGLQLALPLIAILLMTNLTLGILTRSAPQLNIFAIGFPITLGVGLIMLDVTLPYFAPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHH
FEQLIASGLDAATSVVRTLRPH
HHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure
MISLTDAQLNVWLISFIWPLTRILGLVMVAPVFGHRAVPGRVKIGLGIFIALIAAPTLPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCC
MPAVGLGSWHGLFILVQQFLIGVAIGFIMRIVFAAVEAAGEIIGLQMGLGFASFFDPQSA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
GQTLVLARFFNMLAVLLMLAVNAHLLLLGVLVESFQILPISHEPLAAAGFRNVAAFGTTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
FSLGLQLALPLIAILLMTNLTLGILTRSAPQLNIFAIGFPITLGVGLIMLDVTLPYFAPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHH
FEQLIASGLDAATSVVRTLRPH
HHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]