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The map label for this gene is fliP [H]

Identifier: 74317628

GI number: 74317628

Start: 1693769

End: 1694530

Strand: Direct

Name: fliP [H]

Synonym: Tbd_1610

Alternate gene names: 74317628

Gene position: 1693769-1694530 (Clockwise)

Preceding gene: 74317627

Following gene: 74317629

Centisome position: 58.21

GC content: 63.78

Gene sequence:

>762_bases
GTGAAAAGTAAATTATTTCACCGCGTCGCGCAGGCGCTCGTCATGCTGGCCGCGCTCGCCCTTCCGACGTTCGCGCTCGC
CCAGAGCGCCGGCCTGCCGGCGTTCACGAGCACGCCGTCGGGCGGCGGCGGCCAGACCTACACGCTCAGCCTGCAGACGC
TGCTGCTGCTGACGTCGCTCTCCTTCCTGCCCGCGGCCCTGCTGATGATGACGAGCTTCACGCGCATCATCATCGTGCTG
TCGCTGCTGCGCCACGCGCTCGGCACACAGTCGTCGCCGCCGAATCAGGTGCTCATCGGACTCGCGCTGTTCCTAACGCT
GTTCGTGATGGGGCCGACCTTCGACAAGATCTACGTCGAGGCATATCAGCCGCTGGCGGAAAACCGCATCCAGATGCAGG
AGGCGCTCGACAAGGGCGCCGTGCCGCTACGCGCCTTCATGCTCAAGCAGACGCGCGAGAGCGACCTCGCGCTGTTCGTT
AAGATGTCGCGCAGCCCGGCGCCGAAGACGGCCGCCGACATTCCGATGCGCGTGCTGATTCCGGCCTACATCACGAGCGA
ACTCAAGACCGCGTTCCAGATCGGCTTCGCGGTGTTCATCCCCTTTCTGATCATCGACATGGTCGTCGCCAGCATCCTCA
TGGCGATGGGCATGATGATGGTCTCGCCCGCGATCGTCGCGCTGCCGTTCAAGATCATCCTGTTCGTGCTCGTGGACGGC
TGGAACCTGCTGCTCGGCTCGCTCGCACAAAGCTTTTACTAG

Upstream 100 bases:

>100_bases
ACCGTGCCGCCGCAGGCCGGCTCGGGGATCGGACTCGGCTCCCCCTTCGCCGCCCGCCTGCAACAGCTCATCGAAAAATC
TCCCTACGGGGACAAGCGTC

Downstream 100 bases:

>100_bases
GAAATCGCAATGACGCCCGAAAGCGTAATGACCATCGGCCGCACCGCACTCGAAATGACGATCCTGGTCTCGGCGCCGGT
GCTGCTCGTCACGCTCGTCG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKSKLFHRVAQALVMLAALALPTFALAQSAGLPAFTSTPSGGGGQTYTLSLQTLLLLTSLSFLPAALLMMTSFTRIIIVL
SLLRHALGTQSSPPNQVLIGLALFLTLFVMGPTFDKIYVEAYQPLAENRIQMQEALDKGAVPLRAFMLKQTRESDLALFV
KMSRSPAPKTAADIPMRVLIPAYITSELKTAFQIGFAVFIPFLIIDMVVASILMAMGMMMVSPAIVALPFKIILFVLVDG
WNLLLGSLAQSFY

Sequences:

>Translated_253_residues
MKSKLFHRVAQALVMLAALALPTFALAQSAGLPAFTSTPSGGGGQTYTLSLQTLLLLTSLSFLPAALLMMTSFTRIIIVL
SLLRHALGTQSSPPNQVLIGLALFLTLFVMGPTFDKIYVEAYQPLAENRIQMQEALDKGAVPLRAFMLKQTRESDLALFV
KMSRSPAPKTAADIPMRVLIPAYITSELKTAFQIGFAVFIPFLIIDMVVASILMAMGMMMVSPAIVALPFKIILFVLVDG
WNLLLGSLAQSFY
>Mature_253_residues
MKSKLFHRVAQALVMLAALALPTFALAQSAGLPAFTSTPSGGGGQTYTLSLQTLLLLTSLSFLPAALLMMTSFTRIIIVL
SLLRHALGTQSSPPNQVLIGLALFLTLFVMGPTFDKIYVEAYQPLAENRIQMQEALDKGAVPLRAFMLKQTRESDLALFV
KMSRSPAPKTAADIPMRVLIPAYITSELKTAFQIGFAVFIPFLIIDMVVASILMAMGMMMVSPAIVALPFKIILFVLVDG
WNLLLGSLAQSFY

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=224, Percent_Identity=68.3035714285714, Blast_Score=319, Evalue=1e-88,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27460; Mature: 27460

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKLFHRVAQALVMLAALALPTFALAQSAGLPAFTSTPSGGGGQTYTLSLQTLLLLTSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH
SFLPAALLMMTSFTRIIIVLSLLRHALGTQSSPPNQVLIGLALFLTLFVMGPTFDKIYVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
AYQPLAENRIQMQEALDKGAVPLRAFMLKQTRESDLALFVKMSRSPAPKTAADIPMRVLI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCHHHCCHHHHH
PAYITSELKTAFQIGFAVFIPFLIIDMVVASILMAMGMMMVSPAIVALPFKIILFVLVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNLLLGSLAQSFY
HHHHHHHHHHHCC
>Mature Secondary Structure
MKSKLFHRVAQALVMLAALALPTFALAQSAGLPAFTSTPSGGGGQTYTLSLQTLLLLTSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHH
SFLPAALLMMTSFTRIIIVLSLLRHALGTQSSPPNQVLIGLALFLTLFVMGPTFDKIYVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
AYQPLAENRIQMQEALDKGAVPLRAFMLKQTRESDLALFVKMSRSPAPKTAADIPMRVLI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCHHHCCHHHHH
PAYITSELKTAFQIGFAVFIPFLIIDMVVASILMAMGMMMVSPAIVALPFKIILFVLVDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WNLLLGSLAQSFY
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]