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The map label for this gene is fliF [H]

Identifier: 74317618

GI number: 74317618

Start: 1685101

End: 1686747

Strand: Direct

Name: fliF [H]

Synonym: Tbd_1600

Alternate gene names: 74317618

Gene position: 1685101-1686747 (Clockwise)

Preceding gene: 74317616

Following gene: 74317619

Centisome position: 57.91

GC content: 65.51

Gene sequence:

>1647_bases
ATGGCGGTAGCAGGTGAAATGGTGGTTCCGGGCAACGTCATGGAATTTACCCGCACGGCCGGCGGGCGAAAAATCCTGTT
GATGCTCGGCGTCGCCGCGTCGGTCGCGGTGATGGCTGCGGTCTGGATGTGGGGCCAGCAGCCCGAGTATCGCGTGCTGT
TCTCCAACTTCAGCGACCGCGACGGCGGCGCGATCGTCGCCGAGCTGGAAAAAATGAACGTCCCCTACAAATACGCCGAA
GGCGGCGGCGCGGTGCTGGTGCCGGCCGACCGCGTGCACGACGCGCGTCTGAAGCTCGCCTCGCAAGGCCTGCCCAAGGG
CGGCAACGTCGGGTTCGAGCTGATGGAGAACCAACGGCTCGGCGCCTCGCAATTCGTCGAACAGGTCAATTTCCAGCGCG
CGATGGAAGGCGAACTCGCACGATCGATCGAATCGGTCTCGGCCGTGCAGGCCGCGCGCGTGCACCTCGCCCTGCCCAAG
GACTCGATTTTCGTTTCCGAGCAGAAACAGCCGACCGCCTCCGTACTGCTCAATCTTCACCCCGGCCGCGCCCTCGATCC
GCAGCAGGTCAGCGCGATCGTTCACCTGGTTGCGAGCAGCGTGCCCGAACTCGCGACCAAGAACGTCACCGTCGTCGACC
AGAACGGCAATCTGCTGTCCGACGCCGGCAAGGCCCCGCGCGTCAACGGCATGGATCCGAGCCAGATCAAATACGTGCAA
GAGCTGCAGCAGGACGTCGTCCAGCGCATCGAATCGATCATCACGCCGATCGTCGGCCCCGGCAACGTGCGCGCCGAAGC
GACCGCGGACGTCGATTTTTCGCGCAGCGAGCAGGCCGTCGAATCGTACAAGCCGAACCAGACCCCCGACGCGATGGCGA
TCCGCAGCCAGCAGACGAGCGAATCGCTCAATGGCTCGGCGAACCCCGCCGGCGTACCCGGCGCGCTGATCAATCAGCCG
CCTGCGCCCGCGACCGCACCGATCACAGTGCCCGGCCAGGCGACGCCGGCACCCGCGGCGGCGGCGGCGCAGCCTGCGAC
GAGCACGCGCAAGGACGCGACGGTCAATTACGAAGTCGACAAGACGATCCAGTACGTCCAGCAGGCGGGCGGCGGCCTCA
AGCGGCTGTCGGTCGGGGTCGTCGTCAACTACAAGAAGACCGTCGACAAGGCCGGCAAGGTCGCCATGAAGCCCTTGAGC
GAAGCCGAGAAAACCCAGATCACGAATCTGGTCAAGGAAGCGATGGGCTACAACCAGGCGCGCGGCGACACCGTCAACGT
CGTCAACAGCCCCTTTGCCAGCGCCCAGGAGGAAGACCTCCCCCAACCGCCGTTCTGGAAGCAGCCGGAGTACGCCGAAT
ACTTCGACATCGCACGCAACGTGGGCAAGTACCTGCTGATGGGCATCGCGCTGCTCCTGCTCTACCTGAAAGTGGCCAAG
CCCCTGCTGAAGAAGATGTCCGAGCAGCAGGCGTTGGCCGCGCCCAACCACCCCCTGCACCTGGAGCAACTCGCGACCGA
CGAGCGCGCCGCCCTTCCCGGCCAGCGCAACTACCAGGAGAACCTGTCGCGCGCGCAGAGGCTCGCCAACGAGGACCCGC
GCGTCGTCGCCAACATCGTGAAGACCTGGGTCGCCAACAATGACTGA

Upstream 100 bases:

>100_bases
TGCGTTCACATAGCGAAATTCCTGGCAGGCGACGCGACGGGCAGCAAACCGGAAAACGCACGCCGCGGGGAACGCAGGAC
AAGAACACGAGGACAACGAG

Downstream 100 bases:

>100_bases
GCTCAGCGGCATTACCAAGGGCGCAATCCTGATGCTCGCGCTCGGCGAGGAAGGCGCGTCGGAAGTGATGAAATATCTCG
GCCCGCGCGAGGTACAGAAA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MAVAGEMVVPGNVMEFTRTAGGRKILLMLGVAASVAVMAAVWMWGQQPEYRVLFSNFSDRDGGAIVAELEKMNVPYKYAE
GGGAVLVPADRVHDARLKLASQGLPKGGNVGFELMENQRLGASQFVEQVNFQRAMEGELARSIESVSAVQAARVHLALPK
DSIFVSEQKQPTASVLLNLHPGRALDPQQVSAIVHLVASSVPELATKNVTVVDQNGNLLSDAGKAPRVNGMDPSQIKYVQ
ELQQDVVQRIESIITPIVGPGNVRAEATADVDFSRSEQAVESYKPNQTPDAMAIRSQQTSESLNGSANPAGVPGALINQP
PAPATAPITVPGQATPAPAAAAAQPATSTRKDATVNYEVDKTIQYVQQAGGGLKRLSVGVVVNYKKTVDKAGKVAMKPLS
EAEKTQITNLVKEAMGYNQARGDTVNVVNSPFASAQEEDLPQPPFWKQPEYAEYFDIARNVGKYLLMGIALLLLYLKVAK
PLLKKMSEQQALAAPNHPLHLEQLATDERAALPGQRNYQENLSRAQRLANEDPRVVANIVKTWVANND

Sequences:

>Translated_548_residues
MAVAGEMVVPGNVMEFTRTAGGRKILLMLGVAASVAVMAAVWMWGQQPEYRVLFSNFSDRDGGAIVAELEKMNVPYKYAE
GGGAVLVPADRVHDARLKLASQGLPKGGNVGFELMENQRLGASQFVEQVNFQRAMEGELARSIESVSAVQAARVHLALPK
DSIFVSEQKQPTASVLLNLHPGRALDPQQVSAIVHLVASSVPELATKNVTVVDQNGNLLSDAGKAPRVNGMDPSQIKYVQ
ELQQDVVQRIESIITPIVGPGNVRAEATADVDFSRSEQAVESYKPNQTPDAMAIRSQQTSESLNGSANPAGVPGALINQP
PAPATAPITVPGQATPAPAAAAAQPATSTRKDATVNYEVDKTIQYVQQAGGGLKRLSVGVVVNYKKTVDKAGKVAMKPLS
EAEKTQITNLVKEAMGYNQARGDTVNVVNSPFASAQEEDLPQPPFWKQPEYAEYFDIARNVGKYLLMGIALLLLYLKVAK
PLLKKMSEQQALAAPNHPLHLEQLATDERAALPGQRNYQENLSRAQRLANEDPRVVANIVKTWVANND
>Mature_547_residues
AVAGEMVVPGNVMEFTRTAGGRKILLMLGVAASVAVMAAVWMWGQQPEYRVLFSNFSDRDGGAIVAELEKMNVPYKYAEG
GGAVLVPADRVHDARLKLASQGLPKGGNVGFELMENQRLGASQFVEQVNFQRAMEGELARSIESVSAVQAARVHLALPKD
SIFVSEQKQPTASVLLNLHPGRALDPQQVSAIVHLVASSVPELATKNVTVVDQNGNLLSDAGKAPRVNGMDPSQIKYVQE
LQQDVVQRIESIITPIVGPGNVRAEATADVDFSRSEQAVESYKPNQTPDAMAIRSQQTSESLNGSANPAGVPGALINQPP
APATAPITVPGQATPAPAAAAAQPATSTRKDATVNYEVDKTIQYVQQAGGGLKRLSVGVVVNYKKTVDKAGKVAMKPLSE
AEKTQITNLVKEAMGYNQARGDTVNVVNSPFASAQEEDLPQPPFWKQPEYAEYFDIARNVGKYLLMGIALLLLYLKVAKP
LLKKMSEQQALAAPNHPLHLEQLATDERAALPGQRNYQENLSRAQRLANEDPRVVANIVKTWVANND

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=547, Percent_Identity=46.2522851919561, Blast_Score=438, Evalue=1e-124,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58902; Mature: 58771

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAGEMVVPGNVMEFTRTAGGRKILLMLGVAASVAVMAAVWMWGQQPEYRVLFSNFSDR
CCCCCCEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
DGGAIVAELEKMNVPYKYAEGGGAVLVPADRVHDARLKLASQGLPKGGNVGFELMENQRL
CCCEEEEEHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
GASQFVEQVNFQRAMEGELARSIESVSAVQAARVHLALPKDSIFVSEQKQPTASVLLNLH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCCCEEEECC
PGRALDPQQVSAIVHLVASSVPELATKNVTVVDQNGNLLSDAGKAPRVNGMDPSQIKYVQ
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHH
ELQQDVVQRIESIITPIVGPGNVRAEATADVDFSRSEQAVESYKPNQTPDAMAIRSQQTS
HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
ESLNGSANPAGVPGALINQPPAPATAPITVPGQATPAPAAAAAQPATSTRKDATVNYEVD
HHCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCEEEEEHH
KTIQYVQQAGGGLKRLSVGVVVNYKKTVDKAGKVAMKPLSEAEKTQITNLVKEAMGYNQA
HHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGDTVNVVNSPFASAQEEDLPQPPFWKQPEYAEYFDIARNVGKYLLMGIALLLLYLKVAK
CCCEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLKKMSEQQALAAPNHPLHLEQLATDERAALPGQRNYQENLSRAQRLANEDPRVVANIV
HHHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KTWVANND
HHHHCCCC
>Mature Secondary Structure 
AVAGEMVVPGNVMEFTRTAGGRKILLMLGVAASVAVMAAVWMWGQQPEYRVLFSNFSDR
CCCCCEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
DGGAIVAELEKMNVPYKYAEGGGAVLVPADRVHDARLKLASQGLPKGGNVGFELMENQRL
CCCEEEEEHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
GASQFVEQVNFQRAMEGELARSIESVSAVQAARVHLALPKDSIFVSEQKQPTASVLLNLH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEECCCCCCCCCEEEECC
PGRALDPQQVSAIVHLVASSVPELATKNVTVVDQNGNLLSDAGKAPRVNGMDPSQIKYVQ
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCCCCCCCCHHHHHHHH
ELQQDVVQRIESIITPIVGPGNVRAEATADVDFSRSEQAVESYKPNQTPDAMAIRSQQTS
HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
ESLNGSANPAGVPGALINQPPAPATAPITVPGQATPAPAAAAAQPATSTRKDATVNYEVD
HHCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCCCCCEEEEEHH
KTIQYVQQAGGGLKRLSVGVVVNYKKTVDKAGKVAMKPLSEAEKTQITNLVKEAMGYNQA
HHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RGDTVNVVNSPFASAQEEDLPQPPFWKQPEYAEYFDIARNVGKYLLMGIALLLLYLKVAK
CCCEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLKKMSEQQALAAPNHPLHLEQLATDERAALPGQRNYQENLSRAQRLANEDPRVVANIV
HHHHHHHHHHHHCCCCCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
KTWVANND
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]