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The map label for this gene is ybjY [C]

Identifier: 74317599

GI number: 74317599

Start: 1664418

End: 1665608

Strand: Reverse

Name: ybjY [C]

Synonym: Tbd_1581

Alternate gene names: 74317599

Gene position: 1665608-1664418 (Counterclockwise)

Preceding gene: 74317600

Following gene: 74317594

Centisome position: 57.24

GC content: 73.55

Gene sequence:

>1191_bases
ATGCGACTGCGCGCAAAAATCGGAATGGCGGTGACGGCAGCCCTCGTGCTCGGCGGCCTCGCGCTCGGCTTCGCGCCGCG
TGCGGTGCCGGTCGACCTCGCCGAGGTCACACGCGGGCCGCTCGCCGTCACGGTCGAAGAGGAGGGCAAGACCCGCGTGC
GCGAGCGCTACCTGGTTTCGGCGCCGGTCGCGGGCTATCTGCGGCGGATCGGCCTCGACGCCGGCGACGCGGTTGCGCGC
GGCCAGGTGCTCGCCGTGATCGACCCGGCACGCTCGGTCGCGCTCGACCCGCGCACGCGTGCCGAAGCCCAGGCGCGGGC
GAGCGCGGCCCGCGCGGCGCTCGCCGCCGCCGAGGAAAACGCGCGCGCGGCAGCGGCCTCGGCGCAGCTCGCGCAGCAGG
AACGCGCGCGCGCCGAAACGCTGCGTCGATCCGATTTCGTTTCCGAACAGGCACTCGACAACACCCGCACGGCGGAGTCC
CAGGCCCGGGCGGCAGCCCGCGCGGCCGAGCACAACGTGCGGGTCGCGCGTTTCGAGCTCGAAACGGCGCGTGCGGCGCT
CGCGAGCAGCGCCCGTTTGCAGGGCGGCACCGCCGAGGCGCTCGAGGTGCGCGCGCCGGTCGCCGCACGCGTGCTCAAGC
TCGTTCATGAAAGCGAGGGCGCGGTCGCGGCCGGTGCGCCGCTGCTCGAAGTCGGCGACCCCGACAGTCTCGAAGTCGAG
GTCGAGGTGCTCTCCAACCACGCTGTGAAGCTCGCGCCGGGGTCGAAAGTGATCCTCGACCGCTGGGGCGGCGAGCGTTC
GGTCGCCGGCCGCGTGCGCGTCGTCGAACCGAGCGGGTTCACGAAGATTTCGGCACTCGGCGTCGAGGAGCAGCGCGTCC
GCGTCATCGTCGACTTCAGCGCGCCGCGCGAGGCGTGGAACCGGCTCGGCGACGGCTACCGCGTCGAGGCGCGCTTCGTG
TTGTGGGAAGGCGAGAACGTGCTGCAGGTGCCGACGAGCGCGCTTTTCAGACAGGGGCAGGGCTGGGCGGTCTTCGTCGT
CGACGGCCGCCGCGTGCGCGTCGCGCCGGTCGAAGTCGGCCAGCGCGCCGGGCTCGCGACCGAGGTGTTGGCGGGCGTTG
CGGCAGGCGACCGCATCGTCGCGCATCCCGACGAGACGATCGAGGACGGCGTGCGGGTGAAGCCGCGCTGA

Upstream 100 bases:

>100_bases
GTGATCGTCTCGGCGCTGCTGTCGGGCCTGCTGCTGTGGCATCGCCTCGGCCGGCTCGACCTCGTCGCGGTGCTCAAGAC
ACGCGAATAGATCGGACACC

Downstream 100 bases:

>100_bases
GGGCTAGGCGGCCCGGTGTGCGCCGGCCTCACGCAGGATTTCGATGACCTCCTCGTCGTCGACCTGTGGAAAATCCGCGT
AGAACTGCCCTACGGCCCGG

Product: secretion protein HlyD

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane Fusion Protein AcrA; Membrane Fusion Protein

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MRLRAKIGMAVTAALVLGGLALGFAPRAVPVDLAEVTRGPLAVTVEEEGKTRVRERYLVSAPVAGYLRRIGLDAGDAVAR
GQVLAVIDPARSVALDPRTRAEAQARASAARAALAAAEENARAAAASAQLAQQERARAETLRRSDFVSEQALDNTRTAES
QARAAARAAEHNVRVARFELETARAALASSARLQGGTAEALEVRAPVAARVLKLVHESEGAVAAGAPLLEVGDPDSLEVE
VEVLSNHAVKLAPGSKVILDRWGGERSVAGRVRVVEPSGFTKISALGVEEQRVRVIVDFSAPREAWNRLGDGYRVEARFV
LWEGENVLQVPTSALFRQGQGWAVFVVDGRRVRVAPVEVGQRAGLATEVLAGVAAGDRIVAHPDETIEDGVRVKPR

Sequences:

>Translated_396_residues
MRLRAKIGMAVTAALVLGGLALGFAPRAVPVDLAEVTRGPLAVTVEEEGKTRVRERYLVSAPVAGYLRRIGLDAGDAVAR
GQVLAVIDPARSVALDPRTRAEAQARASAARAALAAAEENARAAAASAQLAQQERARAETLRRSDFVSEQALDNTRTAES
QARAAARAAEHNVRVARFELETARAALASSARLQGGTAEALEVRAPVAARVLKLVHESEGAVAAGAPLLEVGDPDSLEVE
VEVLSNHAVKLAPGSKVILDRWGGERSVAGRVRVVEPSGFTKISALGVEEQRVRVIVDFSAPREAWNRLGDGYRVEARFV
LWEGENVLQVPTSALFRQGQGWAVFVVDGRRVRVAPVEVGQRAGLATEVLAGVAAGDRIVAHPDETIEDGVRVKPR
>Mature_396_residues
MRLRAKIGMAVTAALVLGGLALGFAPRAVPVDLAEVTRGPLAVTVEEEGKTRVRERYLVSAPVAGYLRRIGLDAGDAVAR
GQVLAVIDPARSVALDPRTRAEAQARASAARAALAAAEENARAAAASAQLAQQERARAETLRRSDFVSEQALDNTRTAES
QARAAARAAEHNVRVARFELETARAALASSARLQGGTAEALEVRAPVAARVLKLVHESEGAVAAGAPLLEVGDPDSLEVE
VEVLSNHAVKLAPGSKVILDRWGGERSVAGRVRVVEPSGFTKISALGVEEQRVRVIVDFSAPREAWNRLGDGYRVEARFV
LWEGENVLQVPTSALFRQGQGWAVFVVDGRRVRVAPVEVGQRAGLATEVLAGVAAGDRIVAHPDETIEDGVRVKPR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41975; Mature: 41975

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRAKIGMAVTAALVLGGLALGFAPRAVPVDLAEVTRGPLAVTVEEEGKTRVRERYLVS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHEEC
APVAGYLRRIGLDAGDAVARGQVLAVIDPARSVALDPRTRAEAQARASAARAALAAAEEN
CCHHHHHHHHCCCCCCHHHCCCEEEEECCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHC
ARAAAASAQLAQQERARAETLRRSDFVSEQALDNTRTAESQARAAARAAEHNVRVARFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEEH
ETARAALASSARLQGGTAEALEVRAPVAARVLKLVHESEGAVAAGAPLLEVGDPDSLEVE
HHHHHHHHHHHHCCCCCCHHEEECCHHHHHHHHHHHCCCCCEECCCCEEECCCCCCEEEE
VEVLSNHAVKLAPGSKVILDRWGGERSVAGRVRVVEPSGFTKISALGVEEQRVRVIVDFS
EEEECCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECC
APREAWNRLGDGYRVEARFVLWEGENVLQVPTSALFRQGQGWAVFVVDGRRVRVAPVEVG
CCHHHHHHCCCCEEEEEEEEEECCCCEEECCHHHHHHCCCCEEEEEECCCEEEEEEHHCC
QRAGLATEVLAGVAAGDRIVAHPDETIEDGVRVKPR
CCCCHHHHHHHHHCCCCEEEECCCHHHHCCEEECCC
>Mature Secondary Structure
MRLRAKIGMAVTAALVLGGLALGFAPRAVPVDLAEVTRGPLAVTVEEEGKTRVRERYLVS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHEEC
APVAGYLRRIGLDAGDAVARGQVLAVIDPARSVALDPRTRAEAQARASAARAALAAAEEN
CCHHHHHHHHCCCCCCHHHCCCEEEEECCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHC
ARAAAASAQLAQQERARAETLRRSDFVSEQALDNTRTAESQARAAARAAEHNVRVARFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEEH
ETARAALASSARLQGGTAEALEVRAPVAARVLKLVHESEGAVAAGAPLLEVGDPDSLEVE
HHHHHHHHHHHHCCCCCCHHEEECCHHHHHHHHHHHCCCCCEECCCCEEECCCCCCEEEE
VEVLSNHAVKLAPGSKVILDRWGGERSVAGRVRVVEPSGFTKISALGVEEQRVRVIVDFS
EEEECCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECC
APREAWNRLGDGYRVEARFVLWEGENVLQVPTSALFRQGQGWAVFVVDGRRVRVAPVEVG
CCHHHHHHCCCCEEEEEEEEEECCCCEEECCHHHHHHCCCCEEEEEECCCEEEEEEHHCC
QRAGLATEVLAGVAAGDRIVAHPDETIEDGVRVKPR
CCCCHHHHHHHHHCCCCEEEECCCHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA