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The map label for this gene is ycfF [C]

Identifier: 74317594

GI number: 74317594

Start: 1659891

End: 1660439

Strand: Reverse

Name: ycfF [C]

Synonym: Tbd_1576

Alternate gene names: 74317594

Gene position: 1660439-1659891 (Counterclockwise)

Preceding gene: 74317599

Following gene: 74317593

Centisome position: 57.06

GC content: 68.67

Gene sequence:

>549_bases
ATGCCGGATGCCACGCGATCCGAGTCTACGCCCTCGCGTCGTGGCGTGCCGCGCCGAGGTGAACCGGTTACACTCGCGCA
AGGCCTTGCAGCCGCCCTCCGGCCTACGCGATCCCCGTGGAGGCCGGTGCAACGAGACATCGACATCCCAGGCATGACCG
TGACGACCCCAGCCAAACCCTGTCCCTTCTGCCAGCTCGAGCCGCACCGCATCGTCGCCGAAGACGCGTTGACGGTCGCG
TACCGCGACGGCTTTCCGGTCTCGCCCGGCCACACCGTGATCATCCCGCGCCGGCATTTTGCGACGCTGTTCGAGGCCAG
CGACGCCGAACGTCTGGCGCTGTTGACGATGATGGAGCACGCGAAGGCCATCCTCGACCGGCACCACGCGCCCGACGGCT
ACAACTTCGGCATCAACCACGGCCCCGCGGGCGGGCAGAGCGTGCCCCACCTCCACATCCACGTCATCCCGCGCTATCGC
GGCGACAAGGAAGACCCGCGCGGCGGCGTGCGCTGGGTGCTCCCCGACAAGGCGAAGTACTGGGCGTGA

Upstream 100 bases:

>100_bases
TGCGCGGCGGTCGGTCGCCGGGTCATGACTTCCAGAGTAGAGGTGGAAGGATTCGTTCACGCCGTTTGACCCTTCCGTTG
CAAAGCGCGCGACCGCCGCG

Downstream 100 bases:

>100_bases
GGGCGCCGTGGATTCGCGCCAGGCGCCGGCCCTTCGCCGGACCGCGGTTCGCGGGCGGGGCTACGACTAAAGTTGTATAT
CCGCGCCCGGGCGTTTCCCC

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPDATRSESTPSRRGVPRRGEPVTLAQGLAAALRPTRSPWRPVQRDIDIPGMTVTTPAKPCPFCQLEPHRIVAEDALTVA
YRDGFPVSPGHTVIIPRRHFATLFEASDAERLALLTMMEHAKAILDRHHAPDGYNFGINHGPAGGQSVPHLHIHVIPRYR
GDKEDPRGGVRWVLPDKAKYWA

Sequences:

>Translated_182_residues
MPDATRSESTPSRRGVPRRGEPVTLAQGLAAALRPTRSPWRPVQRDIDIPGMTVTTPAKPCPFCQLEPHRIVAEDALTVA
YRDGFPVSPGHTVIIPRRHFATLFEASDAERLALLTMMEHAKAILDRHHAPDGYNFGINHGPAGGQSVPHLHIHVIPRYR
GDKEDPRGGVRWVLPDKAKYWA
>Mature_181_residues
PDATRSESTPSRRGVPRRGEPVTLAQGLAAALRPTRSPWRPVQRDIDIPGMTVTTPAKPCPFCQLEPHRIVAEDALTVAY
RDGFPVSPGHTVIIPRRHFATLFEASDAERLALLTMMEHAKAILDRHHAPDGYNFGINHGPAGGQSVPHLHIHVIPRYRG
DKEDPRGGVRWVLPDKAKYWA

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17556280, Length=80, Percent_Identity=36.25, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 20192; Mature: 20061

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDATRSESTPSRRGVPRRGEPVTLAQGLAAALRPTRSPWRPVQRDIDIPGMTVTTPAKP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCC
CPFCQLEPHRIVAEDALTVAYRDGFPVSPGHTVIIPRRHFATLFEASDAERLALLTMMEH
CCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCHHHHHHHHHHH
AKAILDRHHAPDGYNFGINHGPAGGQSVPHLHIHVIPRYRGDKEDPRGGVRWVLPDKAKY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
WA
CC
>Mature Secondary Structure 
PDATRSESTPSRRGVPRRGEPVTLAQGLAAALRPTRSPWRPVQRDIDIPGMTVTTPAKP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCC
CPFCQLEPHRIVAEDALTVAYRDGFPVSPGHTVIIPRRHFATLFEASDAERLALLTMMEH
CCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCHHHHHHHHHHH
AKAILDRHHAPDGYNFGINHGPAGGQSVPHLHIHVIPRYRGDKEDPRGGVRWVLPDKAKY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
WA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]