| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317592
Identifier: 74317592
GI number: 74317592
Start: 1658507
End: 1658950
Strand: Reverse
Name: 74317592
Synonym: Tbd_1574
Alternate gene names: NA
Gene position: 1658950-1658507 (Counterclockwise)
Preceding gene: 74317593
Following gene: 74317591
Centisome position: 57.01
GC content: 64.64
Gene sequence:
>444_bases ATGTTCATGATCGACTACAAGGAACTGAGCTGGTGGTACTGGCTCGTCACCGCCTGCCTGCTTACCGCCGGTGTCGCCGG CTACGAAAGCGCGTTCGTGCTCGCGATCGGCCTGACCATCGTCCAACTCGTGCACTTCACGCTGCGCGAGGGCAGCGTCG CCGCCTTCCCGGTCCAGGTCAGGTTCTGGTACCTGATGCTGCTGCTGGTCTCGCTCCCCGAACCGATGCAGTGGCTTTAC TGGGTCCCGACGATCGGCACCTGGGCGCAGCTCATTTTGGGCTACTGCACGATGGCGCGCTGCGTGTCGCTGCTGCCGTG GAACCGCAGCGAGCCGTTCTCGCTCGGTCTCGTGGGCCGGACCTTCTTCTCGCGCCCCGTTCCCGGCAACATCCTGCAGG GCCTGCCGACCAAGCCCGCGGAAACCCCAACGATTGCTGAGTAG
Upstream 100 bases:
>100_bases TGAACGTACTGATCTAAAACAGAATTTCGCCGGCCGCGGCGCAGCCGGCGGGACGTGCTTGGTTTATAGTGCGCGCCTGA CAGATCAAAGGAGAGACAAC
Downstream 100 bases:
>100_bases CCGACGTTCGTCGTTTCAGGCACCCCGAGGCGGACGCGCGCGCCGCCAGTACGGTGCCTGGCGGCGCGCCCAGTCAGCCG AGCCCGAGGAACGACAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MFMIDYKELSWWYWLVTACLLTAGVAGYESAFVLAIGLTIVQLVHFTLREGSVAAFPVQVRFWYLMLLLVSLPEPMQWLY WVPTIGTWAQLILGYCTMARCVSLLPWNRSEPFSLGLVGRTFFSRPVPGNILQGLPTKPAETPTIAE
Sequences:
>Translated_147_residues MFMIDYKELSWWYWLVTACLLTAGVAGYESAFVLAIGLTIVQLVHFTLREGSVAAFPVQVRFWYLMLLLVSLPEPMQWLY WVPTIGTWAQLILGYCTMARCVSLLPWNRSEPFSLGLVGRTFFSRPVPGNILQGLPTKPAETPTIAE >Mature_147_residues MFMIDYKELSWWYWLVTACLLTAGVAGYESAFVLAIGLTIVQLVHFTLREGSVAAFPVQVRFWYLMLLLVSLPEPMQWLY WVPTIGTWAQLILGYCTMARCVSLLPWNRSEPFSLGLVGRTFFSRPVPGNILQGLPTKPAETPTIAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16648; Mature: 16648
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMIDYKELSWWYWLVTACLLTAGVAGYESAFVLAIGLTIVQLVHFTLREGSVAAFPVQV CEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH RFWYLMLLLVSLPEPMQWLYWVPTIGTWAQLILGYCTMARCVSLLPWNRSEPFSLGLVGR HHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHH TFFSRPVPGNILQGLPTKPAETPTIAE HHHCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFMIDYKELSWWYWLVTACLLTAGVAGYESAFVLAIGLTIVQLVHFTLREGSVAAFPVQV CEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH RFWYLMLLLVSLPEPMQWLYWVPTIGTWAQLILGYCTMARCVSLLPWNRSEPFSLGLVGR HHHHHHHHHHHCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHH TFFSRPVPGNILQGLPTKPAETPTIAE HHHCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA