| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fabH
Identifier: 74317569
GI number: 74317569
Start: 1635189
End: 1636148
Strand: Reverse
Name: fabH
Synonym: Tbd_1551
Alternate gene names: 74317569
Gene position: 1636148-1635189 (Counterclockwise)
Preceding gene: 74317570
Following gene: 74317568
Centisome position: 56.23
GC content: 65.94
Gene sequence:
>960_bases TTGACCTATTCCCGCATTCTCGGCACCGGCGGTTACCTGCCGGCGCGCATCTTGACCAACGCCGACCTTGAGAAGCTCGT CGACACCAACGACCAGTGGATCGTCGACCGCACCGGCATCCGCGAACGGCACATCGCGGCCGACGGCGAATTCACGAGCG ACCTCGCGACTGCGGCAGCCCGCGCGGCACTCGAGGCGGCGAATCTCGCGGCCGACGACATCGACCTCCTGCTGGTCGCG ACGACGACGCCGGATCTGGTCTTTCCAAGCACGGCCTGCATCGTGCAGTCCAAGCTCGGCATGACCAACGGCAAGCCGGC CTTCGATCTACAGGCCGTCTGCAGCGGCTTCGTCTACGCGCTCTCGGTGGCCGACCAGTTCATCAAGGGCGGCGCGGCGA AGCATGTGCTCGTGGTCGGCGCGGAGACCTTGTCGCGCATCACCGACTGGAACGACCGCAGCAACTGTATTCTGTGGGGG GACGGCGCAGGCGCCGTCGTCGTCGGAGCATCGTCCGAGCCGGGGATCATCGCGACGCATATCCACGCCGATGGCCGGCA CAAGGAATTGCTGCGCACGACGACCGGCCCTTCGAGCGGCTCGAAAACACCCGCGCTCATGCGCATGGAGGGCAACGCGG TGTTCAAGATGGCTGTCAACACGCTCGATCGCATTGTTGACGAGACGCTCGAGGCGAACGGCCTCGCCAAGACCGACATC GATTGGCTGGTGCCGCATCAGGCCAACATCCGCATCATCTCGGCGACCGCGAAGAAGCTCGGCATGAGCATGGACAACGT CGTGACGACGGTCGCCGGACACGGCAACACCTCGGCCGCGTCGGTGCCGCTCGCGTTCGACGCCGCCGTGCGGGACGGCC GTATCAAGCGCGGCCAGATCGTGCTCATGGAGGCGTTCGGCGGGGGGTTCACCTGGGGCTCGGCGCTGCTTAGGTATTGA
Upstream 100 bases:
>100_bases ACGCCTTCGAGCATGCGATCGAAACCGCCGGCGACGAGGTCCGCAACAACGTGCTGAAACGCATCACGGATCAGATCCAA CTCCTGCAACGGGTGGCCGC
Downstream 100 bases:
>100_bases TGGCACGGCCACCGAACGCAGCGTGTCGACGTCATGTTCCGAATTCCCGCTGGTGCCGGGGCGCTGCAGTGACTCCGCCG CGCTAGAGGGTCGCACAGTG
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTYSRILGTGGYLPARILTNADLEKLVDTNDQWIVDRTGIRERHIAADGEFTSDLATAAARAALEAANLAADDIDLLLVA TTTPDLVFPSTACIVQSKLGMTNGKPAFDLQAVCSGFVYALSVADQFIKGGAAKHVLVVGAETLSRITDWNDRSNCILWG DGAGAVVVGASSEPGIIATHIHADGRHKELLRTTTGPSSGSKTPALMRMEGNAVFKMAVNTLDRIVDETLEANGLAKTDI DWLVPHQANIRIISATAKKLGMSMDNVVTTVAGHGNTSAASVPLAFDAAVRDGRIKRGQIVLMEAFGGGFTWGSALLRY
Sequences:
>Translated_319_residues MTYSRILGTGGYLPARILTNADLEKLVDTNDQWIVDRTGIRERHIAADGEFTSDLATAAARAALEAANLAADDIDLLLVA TTTPDLVFPSTACIVQSKLGMTNGKPAFDLQAVCSGFVYALSVADQFIKGGAAKHVLVVGAETLSRITDWNDRSNCILWG DGAGAVVVGASSEPGIIATHIHADGRHKELLRTTTGPSSGSKTPALMRMEGNAVFKMAVNTLDRIVDETLEANGLAKTDI DWLVPHQANIRIISATAKKLGMSMDNVVTTVAGHGNTSAASVPLAFDAAVRDGRIKRGQIVLMEAFGGGFTWGSALLRY >Mature_318_residues TYSRILGTGGYLPARILTNADLEKLVDTNDQWIVDRTGIRERHIAADGEFTSDLATAAARAALEAANLAADDIDLLLVAT TTPDLVFPSTACIVQSKLGMTNGKPAFDLQAVCSGFVYALSVADQFIKGGAAKHVLVVGAETLSRITDWNDRSNCILWGD GAGAVVVGASSEPGIIATHIHADGRHKELLRTTTGPSSGSKTPALMRMEGNAVFKMAVNTLDRIVDETLEANGLAKTDID WLVPHQANIRIISATAKKLGMSMDNVVTTVAGHGNTSAASVPLAFDAAVRDGRIKRGQIVLMEAFGGGFTWGSALLRY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=317, Percent_Identity=61.198738170347, Blast_Score=392, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_THIDA (Q3SIM4)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315309.1 - ProteinModelPortal: Q3SIM4 - SMR: Q3SIM4 - STRING: Q3SIM4 - GeneID: 3672031 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1551 - NMPDR: fig|292415.3.peg.1550 - eggNOG: COG0332 - HOGENOM: HBG649927 - OMA: ICATSTP - PhylomeDB: Q3SIM4 - ProtClustDB: PRK09352 - BioCyc: TDEN292415:TBD_1551-MONOMER - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.41
Molecular weight: Translated: 33692; Mature: 33561
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: ACT_SITE 114-114 ACT_SITE 246-246 ACT_SITE 276-276
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSRILGTGGYLPARILTNADLEKLVDTNDQWIVDRTGIRERHIAADGEFTSDLATAAA CCCHHEECCCCCCHHHHHCCCCHHHHHCCCCCEEEECCCCCHHEEECCCCHHHHHHHHHH RAALEAANLAADDIDLLLVATTTPDLVFPSTACIVQSKLGMTNGKPAFDLQAVCSGFVYA HHHHHHHHCCCCCEEEEEEEECCCCEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LSVADQFIKGGAAKHVLVVGAETLSRITDWNDRSNCILWGDGAGAVVVGASSEPGIIATH HHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEE IHADGRHKELLRTTTGPSSGSKTPALMRMEGNAVFKMAVNTLDRIVDETLEANGLAKTDI EECCCCHHHHHHCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCC DWLVPHQANIRIISATAKKLGMSMDNVVTTVAGHGNTSAASVPLAFDAAVRDGRIKRGQI CEECCCCCCEEEEEEEHHHHCCCHHHHEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCEE VLMEAFGGGFTWGSALLRY EEEEECCCCCHHHHHHHCC >Mature Secondary Structure TYSRILGTGGYLPARILTNADLEKLVDTNDQWIVDRTGIRERHIAADGEFTSDLATAAA CCHHEECCCCCCHHHHHCCCCHHHHHCCCCCEEEECCCCCHHEEECCCCHHHHHHHHHH RAALEAANLAADDIDLLLVATTTPDLVFPSTACIVQSKLGMTNGKPAFDLQAVCSGFVYA HHHHHHHHCCCCCEEEEEEEECCCCEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LSVADQFIKGGAAKHVLVVGAETLSRITDWNDRSNCILWGDGAGAVVVGASSEPGIIATH HHHHHHHHCCCCCCEEEEECHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEE IHADGRHKELLRTTTGPSSGSKTPALMRMEGNAVFKMAVNTLDRIVDETLEANGLAKTDI EECCCCHHHHHHCCCCCCCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCCCCCC DWLVPHQANIRIISATAKKLGMSMDNVVTTVAGHGNTSAASVPLAFDAAVRDGRIKRGQI CEECCCCCCEEEEEEEHHHHCCCHHHHEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCEE VLMEAFGGGFTWGSALLRY EEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA