| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74317533
Identifier: 74317533
GI number: 74317533
Start: 1603263
End: 1603715
Strand: Reverse
Name: 74317533
Synonym: Tbd_1515
Alternate gene names: NA
Gene position: 1603715-1603263 (Counterclockwise)
Preceding gene: 74317534
Following gene: 74317530
Centisome position: 55.11
GC content: 60.93
Gene sequence:
>453_bases ATGAGTGGACTGATCGCCAACTTCCCCAGCGACGGCATCGTCACGATCAACCGGGTCGTTCTCAAGCCCGAATACAGCGT CGACGACCTGCAGGAGCGCGTGGCCTTCCTGTGCGAGAACGTCAAGACCTATCACTCGGACACGGGTTTCGTTGGCGGCT TCGTCGCGCTGAACTCGGGCCAGGTGTCGAACGAAGGCTCGACGATCGGCAAGCCCGTCGAAAGCCCGATGAAAGGCAAG GAAGCGCTGATCGTGACCTTCTGGACGGACTTCGACAGCCACGAAAAGTCGCACCGTTCCGAGACCTTCCAGCCCCTCTT CGAGAAAGCGCTTGAACTGTGCGAGAACGGCAACGAGGAGATCGCGTACGAGATGCTGTGGTCGGGCAAGGCTTACGCGC CTGAGGAGATCACGGCAGCGCGCCAGGCGAAGGAACAGTACGCGGCAGCCTGA
Upstream 100 bases:
>100_bases GCTTATCCATCTCGCCCGAAGCATTAGAATTTAATTGTTGACTAATATACTCAAGTATCTAGACTGACACCGTAGTTCAA CACTTCAAGGAGAGAGAATC
Downstream 100 bases:
>100_bases CGGGCATCGCGTACGCAGCAGGACGGCGGGTAATCCCGCCGTTTTTTTTTGCCCCGAGGTGTCAGAACGCGTGCAGATAG CGCACGCCGATATGGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSGLIANFPSDGIVTINRVVLKPEYSVDDLQERVAFLCENVKTYHSDTGFVGGFVALNSGQVSNEGSTIGKPVESPMKGK EALIVTFWTDFDSHEKSHRSETFQPLFEKALELCENGNEEIAYEMLWSGKAYAPEEITAARQAKEQYAAA
Sequences:
>Translated_150_residues MSGLIANFPSDGIVTINRVVLKPEYSVDDLQERVAFLCENVKTYHSDTGFVGGFVALNSGQVSNEGSTIGKPVESPMKGK EALIVTFWTDFDSHEKSHRSETFQPLFEKALELCENGNEEIAYEMLWSGKAYAPEEITAARQAKEQYAAA >Mature_149_residues SGLIANFPSDGIVTINRVVLKPEYSVDDLQERVAFLCENVKTYHSDTGFVGGFVALNSGQVSNEGSTIGKPVESPMKGKE ALIVTFWTDFDSHEKSHRSETFQPLFEKALELCENGNEEIAYEMLWSGKAYAPEEITAARQAKEQYAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16572; Mature: 16440
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLIANFPSDGIVTINRVVLKPEYSVDDLQERVAFLCENVKTYHSDTGFVGGFVALNSG CCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC QVSNEGSTIGKPVESPMKGKEALIVTFWTDFDSHEKSHRSETFQPLFEKALELCENGNEE CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH IAYEMLWSGKAYAPEEITAARQAKEQYAAA EEHHHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SGLIANFPSDGIVTINRVVLKPEYSVDDLQERVAFLCENVKTYHSDTGFVGGFVALNSG CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC QVSNEGSTIGKPVESPMKGKEALIVTFWTDFDSHEKSHRSETFQPLFEKALELCENGNEE CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH IAYEMLWSGKAYAPEEITAARQAKEQYAAA EEHHHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA