| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is hppA [H]
Identifier: 74317518
GI number: 74317518
Start: 1589811
End: 1591850
Strand: Reverse
Name: hppA [H]
Synonym: Tbd_1500
Alternate gene names: 74317518
Gene position: 1591850-1589811 (Counterclockwise)
Preceding gene: 74317519
Following gene: 74317517
Centisome position: 54.71
GC content: 66.27
Gene sequence:
>2040_bases ATGAATGAAGGCTTGCTGTTCGCTCTCGTGGCGGCAGGGCTTGCCCTGCTCTACGGGATCATATCGATCAAATGGATCCT GGCGCTCCCGAGCGGCAACGACAGGATGCGTGAGATCGCGGCGGCGGTGCAGGAGGGTGCCTCCGCCTATCTGAATCGGC AATACACGACGATCGGGATCGTCGGCGTGATCCTGCTGATCGCCATCTTCCTGTCGCTCGGCTGGCAGACCGCGGTCGGC TTCGCGCTCGGCGCCGTGCTCTCGGGCCTGACCGGCTACATCGGCATGAACGTCTCGGTGCGTGCCAACGTGCGCACCGC GCAGGCCGCCACCAACGGCCTCAACGCCGCGCTCAACGTCGCGTTCAAGGGCGGCGCCATCACCGGCCTGCTGGTCGTCG GCCTCGGCCTCTTGGGCGTCGCCGGCTACTACGCCGTGCTGACGCTGGTGCTCGGCGAAAGCACCGAGGCTGCGACGCAC GCGCTCGTCGGCCTCGCGTTCGGCGGTTCGCTGATCTCGATCTTCGCGCGTCTCGGCGGCGGCATCTTCACCAAGGGCGC CGACGTCGGCGCGGACCTCGTCGGCAAGGTCGAAGCGGGCATCCCCGAAGACGACCCGCGCAACCCGGCCGTGATCGCTG ACAACGTCGGCGACAACGTCGGCGACTGCGCCGGCATGGCGGCCGACCTGTTCGAGACCTACGCCGTGACGATCATCGCG ACGATGCTGCTCGGCGGCCTGTTGATCACCGGCTCGCCCGAAGCCGTGATCTATCCGCTCGTGCTCGGCGGCTTCTCGAT CATCGCTTCGGTCATCGGCACCTTCTTCGTCAAGGCGCGTGAAGGCGGCAAGATCATGAACGCCCTGTATCGCGGCCTGA TCGTCTCCGGCGTGCTCGCCGCGATCGCCTTCTATCCGATCACGACCTGGATGATGGGCGAGGGCGTGACGATCGGCGGC GAACTCGTGACCTCGCTGAACCTCTACTTCGCCTCGCTGATCGGCCTCGCGCTGACCGCGGCGATGGTGTGGATCACCGA GTACTACACGGCGACCGAATTCAGCCCGGTCCGCCACATCGCGCAGGCCTCGACGACCGGCCACGGCACCAACGTGATCG CCGGCCTCGGCGTGTCGATGAAGTCGACCGCAGCGCCGGTGCTCGCCGTCTGCGCCGCGATCTGGGGCGCCTATGAACTC GCGGGCCTCTACGGGATTGCGATCGCTGCGACCTCGATGCTGTCGATGGCCGGCATCATCGTCGCCCTCGACGCCTACGG CCCGATCACCGACAACGCCGGCGGCATCGCCGAAATGGCAGGCCTGCCCGACAGCATCCGCGACATCACCGACCCGCTCG ACGCCGTCGGCAACACGACCAAGGCGGTGACCAAGGGCTACGCGATCGGCTCGGCCGGCCTTGCCGCGCTCGTGCTCTTC GCCGACTACACCCACGCCCTGTCCACCCACGGCGGCCCGGCGCTGAGCTTCGACCTGTCGAACCACATGGTCATCATCGG CCTCTTCATCGGCGGCATGGTTCCTTATCTCTTCGGCGCCATGGGCATGGAAGCGGTCGGTCGTGCGGCCGGTTCGGTCG TCGTCGAGGTGCGTCGCCAGTTCAAGAGCATCCCCGGCATCATGGAAGGCACGGGCAAGCCGGAATACGGCACTTGCGTC GACATGCTGACCAAAGCCGCGATCAAGGAAATGATCGTCCCGTCGCTGCTGCCGGTCGCGGTGCCTATCATCGTCGGCCT CGCCCTCGGCCCGCAGGCCCTGGGCGGCGTGCTCGTGGGCACGATCATCACCGGCATCTTCGTCGCGATTTCGATGACCA CCGGCGGCGGCGCCTGGGACAACGCCAAGAAGTACATCGAGGAGGGCAACCACGGCGGCAAGGGTTCAGAAGCGCATAAA GCTGCCGTTACTGGGGATACCGTCGGCGATCCGTACAAGGACACCGCCGGTCCGGCCGTCAACCCGCTGATCAAGATCAT CAACATCGTAGCGCTCTTGATCGTGCCGCTGATCATGTAA
Upstream 100 bases:
>100_bases CCGGGCACGCGTTTCGAAGGCGGGCTCGCGATGGGCAGGGATCAGTAACCGACGGTAGCGAAAGCTGCCGTTTTTTTTTG TTTTTTGAGGAGAACGGATA
Downstream 100 bases:
>100_bases CACAGCCAGCTGAGTACGGCCATCTCACGCCCGGGGCCAGCGCGCCCCGGAACGACAACAATATATTGAAGAGAGGAATT GACGATGGCTAAAAACATGG
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase [H]
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MNEGLLFALVAAGLALLYGIISIKWILALPSGNDRMREIAAAVQEGASAYLNRQYTTIGIVGVILLIAIFLSLGWQTAVG FALGAVLSGLTGYIGMNVSVRANVRTAQAATNGLNAALNVAFKGGAITGLLVVGLGLLGVAGYYAVLTLVLGESTEAATH ALVGLAFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTIIA TMLLGGLLITGSPEAVIYPLVLGGFSIIASVIGTFFVKAREGGKIMNALYRGLIVSGVLAAIAFYPITTWMMGEGVTIGG ELVTSLNLYFASLIGLALTAAMVWITEYYTATEFSPVRHIAQASTTGHGTNVIAGLGVSMKSTAAPVLAVCAAIWGAYEL AGLYGIAIAATSMLSMAGIIVALDAYGPITDNAGGIAEMAGLPDSIRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLF ADYTHALSTHGGPALSFDLSNHMVIIGLFIGGMVPYLFGAMGMEAVGRAAGSVVVEVRRQFKSIPGIMEGTGKPEYGTCV DMLTKAAIKEMIVPSLLPVAVPIIVGLALGPQALGGVLVGTIITGIFVAISMTTGGGAWDNAKKYIEEGNHGGKGSEAHK AAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPLIM
Sequences:
>Translated_679_residues MNEGLLFALVAAGLALLYGIISIKWILALPSGNDRMREIAAAVQEGASAYLNRQYTTIGIVGVILLIAIFLSLGWQTAVG FALGAVLSGLTGYIGMNVSVRANVRTAQAATNGLNAALNVAFKGGAITGLLVVGLGLLGVAGYYAVLTLVLGESTEAATH ALVGLAFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTIIA TMLLGGLLITGSPEAVIYPLVLGGFSIIASVIGTFFVKAREGGKIMNALYRGLIVSGVLAAIAFYPITTWMMGEGVTIGG ELVTSLNLYFASLIGLALTAAMVWITEYYTATEFSPVRHIAQASTTGHGTNVIAGLGVSMKSTAAPVLAVCAAIWGAYEL AGLYGIAIAATSMLSMAGIIVALDAYGPITDNAGGIAEMAGLPDSIRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLF ADYTHALSTHGGPALSFDLSNHMVIIGLFIGGMVPYLFGAMGMEAVGRAAGSVVVEVRRQFKSIPGIMEGTGKPEYGTCV DMLTKAAIKEMIVPSLLPVAVPIIVGLALGPQALGGVLVGTIITGIFVAISMTTGGGAWDNAKKYIEEGNHGGKGSEAHK AAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPLIM >Mature_679_residues MNEGLLFALVAAGLALLYGIISIKWILALPSGNDRMREIAAAVQEGASAYLNRQYTTIGIVGVILLIAIFLSLGWQTAVG FALGAVLSGLTGYIGMNVSVRANVRTAQAATNGLNAALNVAFKGGAITGLLVVGLGLLGVAGYYAVLTLVLGESTEAATH ALVGLAFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTIIA TMLLGGLLITGSPEAVIYPLVLGGFSIIASVIGTFFVKAREGGKIMNALYRGLIVSGVLAAIAFYPITTWMMGEGVTIGG ELVTSLNLYFASLIGLALTAAMVWITEYYTATEFSPVRHIAQASTTGHGTNVIAGLGVSMKSTAAPVLAVCAAIWGAYEL AGLYGIAIAATSMLSMAGIIVALDAYGPITDNAGGIAEMAGLPDSIRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLF ADYTHALSTHGGPALSFDLSNHMVIIGLFIGGMVPYLFGAMGMEAVGRAAGSVVVEVRRQFKSIPGIMEGTGKPEYGTCV DMLTKAAIKEMIVPSLLPVAVPIIVGLALGPQALGGVLVGTIITGIFVAISMTTGGGAWDNAKKYIEEGNHGGKGSEAHK AAVTGDTVGDPYKDTAGPAVNPLIKIINIVALLIVPLIM
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 69054; Mature: 69054
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEGLLFALVAAGLALLYGIISIKWILALPSGNDRMREIAAAVQEGASAYLNRQYTTIGI CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH VGVILLIAIFLSLGWQTAVGFALGAVLSGLTGYIGMNVSVRANVRTAQAATNGLNAALNV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCHHEEE AFKGGAITGLLVVGLGLLGVAGYYAVLTLVLGESTEAATHALVGLAFGGSLISIFARLGG EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTIIA CEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH TMLLGGLLITGSPEAVIYPLVLGGFSIIASVIGTFFVKAREGGKIMNALYRGLIVSGVLA HHHHCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AIAFYPITTWMMGEGVTIGGELVTSLNLYFASLIGLALTAAMVWITEYYTATEFSPVRHI HHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AQASTTGHGTNVIAGLGVSMKSTAAPVLAVCAAIWGAYELAGLYGIAIAATSMLSMAGII HHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALDAYGPITDNAGGIAEMAGLPDSIRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLF EEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHH ADYTHALSTHGGPALSFDLSNHMVIIGLFIGGMVPYLFGAMGMEAVGRAAGSVVVEVRRQ HHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKSIPGIMEGTGKPEYGTCVDMLTKAAIKEMIVPSLLPVAVPIIVGLALGPQALGGVLVG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TIITGIFVAISMTTGGGAWDNAKKYIEEGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAV HHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCHH NPLIKIINIVALLIVPLIM HHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNEGLLFALVAAGLALLYGIISIKWILALPSGNDRMREIAAAVQEGASAYLNRQYTTIGI CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH VGVILLIAIFLSLGWQTAVGFALGAVLSGLTGYIGMNVSVRANVRTAQAATNGLNAALNV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCHHEEE AFKGGAITGLLVVGLGLLGVAGYYAVLTLVLGESTEAATHALVGLAFGGSLISIFARLGG EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTIIA CEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH TMLLGGLLITGSPEAVIYPLVLGGFSIIASVIGTFFVKAREGGKIMNALYRGLIVSGVLA HHHHCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AIAFYPITTWMMGEGVTIGGELVTSLNLYFASLIGLALTAAMVWITEYYTATEFSPVRHI HHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AQASTTGHGTNVIAGLGVSMKSTAAPVLAVCAAIWGAYELAGLYGIAIAATSMLSMAGII HHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALDAYGPITDNAGGIAEMAGLPDSIRDITDPLDAVGNTTKAVTKGYAIGSAGLAALVLF EEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHH ADYTHALSTHGGPALSFDLSNHMVIIGLFIGGMVPYLFGAMGMEAVGRAAGSVVVEVRRQ HHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKSIPGIMEGTGKPEYGTCVDMLTKAAIKEMIVPSLLPVAVPIIVGLALGPQALGGVLVG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH TIITGIFVAISMTTGGGAWDNAKKYIEEGNHGGKGSEAHKAAVTGDTVGDPYKDTAGPAV HHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCHH NPLIKIINIVALLIVPLIM HHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12700255 [H]