| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317504
Identifier: 74317504
GI number: 74317504
Start: 1574167
End: 1574904
Strand: Reverse
Name: 74317504
Synonym: Tbd_1486
Alternate gene names: NA
Gene position: 1574904-1574167 (Counterclockwise)
Preceding gene: 74317507
Following gene: 74317502
Centisome position: 54.12
GC content: 62.74
Gene sequence:
>738_bases ATGAGCGCTGTGTCCGATCCCTACGCCCGCATCTTCCTCCTGAGCCACATGCGCGCCTTCACCAGTTTGGCGGGGCACAT TCTCGGCTCGCATCCGCAGATCAATGGCTACTACGAAATGCACATCAGCTATGAGGATGCCTTGGCGGTGGACAGGCAAC TCGAGCTGTTCCGACAGGGCGATGTGCTCAAGCCAGACAGCCGCTATCTGTTCGACAAGCTGTTGCATAACGACTATGTG CTGAAGCCCGAGCGGCTGGCTCCGGCCGAACTCAAGATCCTGGTTTCCCTGGCGGAGCCGGCGCGTACGATCGGGAGCAT CGTGCATCTATTCCGGCAGAAGCCCGACCCGGACCTTTATGCATCGCCTTTAGAGGCGGCGAACTACTACGTCGCGCGGC TCAAGGCGCTCGCCGACTTTTGCGGCACGGCCGAGCGGGGCTATTGCTACTTCGATGCGGAGCTGTTGCAGGCCGCGCCG GAGCGGCTGCTGCCCCGGCTGTCACACTGGCTCGAACTCGATTCGCCGCTGAGCGAGCGCTACCAGACCTTCAGCCAGAC GGGCAAGGCGGGCAGGGGGGATTCGTCGGCGCGGATTCATGGCGGGCGCATCGACCGCACCCGGGTGGATTACTCGCACG TCGCGGTTCCGGAAGATGCGCTCAGCGCCGCGCAGACGGCATATCGGGAATGTCGGGAACAGATTGTTTCCGGCGCGGCG GATTCGATTCTGAACTAG
Upstream 100 bases:
>100_bases CACTCCAATACCCGTCGCCCGGTTAGGTGGAGGGAAGAGGAGTTGTGTGTTTGCCGCAAGGCAAGCTAGATCGATGGGTT GAACAATAAAGTCTTATTCG
Downstream 100 bases:
>100_bases AAGAGGCTGTCCCAGGCGTCCCGCTCGGCGCGGTAGTTCATCAAGGCTTCGACGATCTGCCGTTTGCGTGCCGCGCGATG CTCGGCGGACTGGATCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSAVSDPYARIFLLSHMRAFTSLAGHILGSHPQINGYYEMHISYEDALAVDRQLELFRQGDVLKPDSRYLFDKLLHNDYV LKPERLAPAELKILVSLAEPARTIGSIVHLFRQKPDPDLYASPLEAANYYVARLKALADFCGTAERGYCYFDAELLQAAP ERLLPRLSHWLELDSPLSERYQTFSQTGKAGRGDSSARIHGGRIDRTRVDYSHVAVPEDALSAAQTAYRECREQIVSGAA DSILN
Sequences:
>Translated_245_residues MSAVSDPYARIFLLSHMRAFTSLAGHILGSHPQINGYYEMHISYEDALAVDRQLELFRQGDVLKPDSRYLFDKLLHNDYV LKPERLAPAELKILVSLAEPARTIGSIVHLFRQKPDPDLYASPLEAANYYVARLKALADFCGTAERGYCYFDAELLQAAP ERLLPRLSHWLELDSPLSERYQTFSQTGKAGRGDSSARIHGGRIDRTRVDYSHVAVPEDALSAAQTAYRECREQIVSGAA DSILN >Mature_244_residues SAVSDPYARIFLLSHMRAFTSLAGHILGSHPQINGYYEMHISYEDALAVDRQLELFRQGDVLKPDSRYLFDKLLHNDYVL KPERLAPAELKILVSLAEPARTIGSIVHLFRQKPDPDLYASPLEAANYYVARLKALADFCGTAERGYCYFDAELLQAAPE RLLPRLSHWLELDSPLSERYQTFSQTGKAGRGDSSARIHGGRIDRTRVDYSHVAVPEDALSAAQTAYRECREQIVSGAAD SILN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27485; Mature: 27354
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVSDPYARIFLLSHMRAFTSLAGHILGSHPQINGYYEMHISYEDALAVDRQLELFRQG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCC DVLKPDSRYLFDKLLHNDYVLKPERLAPAELKILVSLAEPARTIGSIVHLFRQKPDPDLY CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ASPLEAANYYVARLKALADFCGTAERGYCYFDAELLQAAPERLLPRLSHWLELDSPLSER CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHCHHHHHHHHHHHHHCCCHHHHH YQTFSQTGKAGRGDSSARIHGGRIDRTRVDYSHVAVPEDALSAAQTAYRECREQIVSGAA HHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DSILN HHHCC >Mature Secondary Structure SAVSDPYARIFLLSHMRAFTSLAGHILGSHPQINGYYEMHISYEDALAVDRQLELFRQG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCC DVLKPDSRYLFDKLLHNDYVLKPERLAPAELKILVSLAEPARTIGSIVHLFRQKPDPDLY CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ASPLEAANYYVARLKALADFCGTAERGYCYFDAELLQAAPERLLPRLSHWLELDSPLSER CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHCHHHHHHHHHHHHHCCCHHHHH YQTFSQTGKAGRGDSSARIHGGRIDRTRVDYSHVAVPEDALSAAQTAYRECREQIVSGAA HHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DSILN HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA