| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pssA [H]
Identifier: 74317500
GI number: 74317500
Start: 1570033
End: 1570653
Strand: Direct
Name: pssA [H]
Synonym: Tbd_1482
Alternate gene names: 74317500
Gene position: 1570033-1570653 (Clockwise)
Preceding gene: 74317499
Following gene: 74317503
Centisome position: 53.96
GC content: 67.47
Gene sequence:
>621_bases ATGAAACAAGGCAGGCATTTCTCGATGATCCGCGGCTTCCACCTCGCGGACTGGCTCACGCTCGGCAACGCCGGCTGCGG CGTCGCCGCGGTATTCGCCGTGATGAGCCATCTTCAGGCTAGCGCGCCGCAACAATTGCTGCTCGCCGCCGCGCTCGTAG TGGTCGCCTTCGTGCTCGACGTCTTCGATGGCCGCGTCGCGCGCTGGCGGCAGCGGAGCTCACTGCTCGGCCGCGAACTC GACTCGCTCGCCGACATCATCTCCTTCGGCGTCGCGCCGGCGGCGATCGCCTACGGGATCGGCATGAACGGCTTATGGGA CCGCCTCGTGCTGATCTATTTCGTCGCCTGCGGCGTGAGCCGCCTCGCCCGCTTCAACATCACCGCGGACGCCCTGGCGC AGGGCGGCGACAAAGTGAAGTACTTCGAGGGCACGCCGATCCCGACGTCGCTGCTGCTCGTTTTCGTGATGGCCGCCGCG GTCTGGACCGGCGCGACCGGCGAGCGCCTGTGGCTCGGCGTCGTCGGCCTCGGCCCGGGGGACCTTCACCCGCTCGTGCT GATGTTCGCGCTGTCGGGCTCGCTGATGATCAGCCGGACCCTGCACATTCCGAAATTCTGA
Upstream 100 bases:
>100_bases CATTCATCGCCGACCTCAGGATCGCGGCCGGCCTGATCGCGCCGGGCAAATGAATCCAGCCGGCTATAGTGACTGAGCAA TCCCGGCTCGAGGGCAAACC
Downstream 100 bases:
>100_bases AGCCGGGCTCGCGCCCAAGGGGCTACCGCGCCGACGGAAACCGTCGCCCCGCGGCCACGGCCAGCAGCGTCAACCCGGCG CCTCGCGCGAAGCGGAGCCG
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKQGRHFSMIRGFHLADWLTLGNAGCGVAAVFAVMSHLQASAPQQLLLAAALVVVAFVLDVFDGRVARWRQRSSLLGREL DSLADIISFGVAPAAIAYGIGMNGLWDRLVLIYFVACGVSRLARFNITADALAQGGDKVKYFEGTPIPTSLLLVFVMAAA VWTGATGERLWLGVVGLGPGDLHPLVLMFALSGSLMISRTLHIPKF
Sequences:
>Translated_206_residues MKQGRHFSMIRGFHLADWLTLGNAGCGVAAVFAVMSHLQASAPQQLLLAAALVVVAFVLDVFDGRVARWRQRSSLLGREL DSLADIISFGVAPAAIAYGIGMNGLWDRLVLIYFVACGVSRLARFNITADALAQGGDKVKYFEGTPIPTSLLLVFVMAAA VWTGATGERLWLGVVGLGPGDLHPLVLMFALSGSLMISRTLHIPKF >Mature_206_residues MKQGRHFSMIRGFHLADWLTLGNAGCGVAAVFAVMSHLQASAPQQLLLAAALVVVAFVLDVFDGRVARWRQRSSLLGREL DSLADIISFGVAPAAIAYGIGMNGLWDRLVLIYFVACGVSRLARFNITADALAQGGDKVKYFEGTPIPTSLLLVFVMAAA VWTGATGERLWLGVVGLGPGDLHPLVLMFALSGSLMISRTLHIPKF
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=204, Percent_Identity=43.1372549019608, Blast_Score=172, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 22052; Mature: 22052
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQGRHFSMIRGFHLADWLTLGNAGCGVAAVFAVMSHLQASAPQQLLLAAALVVVAFVLD CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VFDGRVARWRQRSSLLGRELDSLADIISFGVAPAAIAYGIGMNGLWDRLVLIYFVACGVS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLARFNITADALAQGGDKVKYFEGTPIPTSLLLVFVMAAAVWTGATGERLWLGVVGLGPG HHHHHCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC DLHPLVLMFALSGSLMISRTLHIPKF HHHHHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure MKQGRHFSMIRGFHLADWLTLGNAGCGVAAVFAVMSHLQASAPQQLLLAAALVVVAFVLD CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VFDGRVARWRQRSSLLGRELDSLADIISFGVAPAAIAYGIGMNGLWDRLVLIYFVACGVS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLARFNITADALAQGGDKVKYFEGTPIPTSLLLVFVMAAAVWTGATGERLWLGVVGLGPG HHHHHCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC DLHPLVLMFALSGSLMISRTLHIPKF HHHHHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8002567; 9384377 [H]