| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317494
Identifier: 74317494
GI number: 74317494
Start: 1563504
End: 1564628
Strand: Reverse
Name: 74317494
Synonym: Tbd_1476
Alternate gene names: NA
Gene position: 1564628-1563504 (Counterclockwise)
Preceding gene: 74317495
Following gene: 74317493
Centisome position: 53.77
GC content: 69.69
Gene sequence:
>1125_bases ATGACAGCCCGCAAGCAGGTCTTCCGCATCGGCATCGTCGGCTCCTACGGCGGCATGAACCTCGGCGACGAGGCGATTCT GCAGAGCATCGTTCAGCAGATTCGCGCCTCGGTCAAAGCCGAGATCACCGTGTTTTCGCGCGACGCCGCGGACACCCGGG CGCGTCACGCCGTCGACAGGACCGTGTCGACGCGGGACGCCTCGCGCGCCGAGTTGCTGCCTTTCATCGAACCGCTCGAC CTGCTGCTCGTCGGGGGCGGCGGCATCCTGTTCGATTCCGAGGCGCGCGTGTTTCTGCGCGAGGCGATGATCGCGCGCGA GGTCGGCGTGCCGTTCATGGTCTACGCGATCGGTGCGGGTCCGCTCGAGGACAGGGCGACGCTCGAGGCCGTGCGCGAAT GTCTCGAGGACGCGAAGATCGTGACGGTGCGCGAGGCATCGGCGCGCCAGGTGCTCGAGGCGGCAGGGGTGCGCCGCGAA ATCATCGTCACGGCCGACCCGGCCTTGCTGCTGCGGCCCGAGCCGCTGCCGCGCAGCGCGTTGCCGCGCGAGGCAGTTGA GTGGAAGGGGCCGGTCGTCGGCATGTCGGTGCGCGAACCGGGCGCGGCCGCACCCGACCTCAGCGAGGACATCTACCACC AGCTCCTCGCCAACGCGGCCGACTTCATGGTCGACCGCTACGGCGCCGAAGTCGTGTTCGTGCCGATGGAGCGCGGCGTG CTCGACATGCAGCACAGCCACGCGGTCGTCGCGCGCATGCTGCGCCCGCAGCGCGCCTCGGTGCTGAAAGGCGAGTACAC CCCGGGCCAGCTGATGACGCTGATCGGGCGCTTTTCGTTCGCCGTCGGCATGCGGCTGCACTTCATGATTTTCTCGGCGC TGCAGCGGGTGCCCTTCGTCGCGCTGCCCTATGCCGCCAAGGTCGGCGGTTTCATCGACCGCATCGGTGTCGGCGCGCCG CCGCTGCAACTCGTCAACGCGGGGCGCCTGATCGCGCACATCGACCGCTCGTGGGACCGCCGCCGCGCGCTGATCCGGCA GATCGACCGCGCGCTGCCCACGCTGCAGGGCGCGGCGCGCCAGACCCACGAACTCATGCTTCGCGTACTGCGCGGGGAAG ACTGA
Upstream 100 bases:
>100_bases TTTTTCTCGCGCTCGTTTTCGTGCCGGCCTTTCTGTTCGCACGCTGGATGATCAAACGTCCGCCGTGGGACAGGCCGGCG CCGAAGTGAGCCGGACGCGC
Downstream 100 bases:
>100_bases AAGGAGCCTCGCAATGCCCGTGTTGCATCGCCCGGAGCAGGCGCTCACCGTGACCCTGCCGCCGCGCAGCGCGCAGGTGG CCGCCGATTGCGACGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Family Protein; CsaB Protein; Polysaccharide Pyruvyl Transferase Csab
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTARKQVFRIGIVGSYGGMNLGDEAILQSIVQQIRASVKAEITVFSRDAADTRARHAVDRTVSTRDASRAELLPFIEPLD LLLVGGGGILFDSEARVFLREAMIAREVGVPFMVYAIGAGPLEDRATLEAVRECLEDAKIVTVREASARQVLEAAGVRRE IIVTADPALLLRPEPLPRSALPREAVEWKGPVVGMSVREPGAAAPDLSEDIYHQLLANAADFMVDRYGAEVVFVPMERGV LDMQHSHAVVARMLRPQRASVLKGEYTPGQLMTLIGRFSFAVGMRLHFMIFSALQRVPFVALPYAAKVGGFIDRIGVGAP PLQLVNAGRLIAHIDRSWDRRRALIRQIDRALPTLQGAARQTHELMLRVLRGED
Sequences:
>Translated_374_residues MTARKQVFRIGIVGSYGGMNLGDEAILQSIVQQIRASVKAEITVFSRDAADTRARHAVDRTVSTRDASRAELLPFIEPLD LLLVGGGGILFDSEARVFLREAMIAREVGVPFMVYAIGAGPLEDRATLEAVRECLEDAKIVTVREASARQVLEAAGVRRE IIVTADPALLLRPEPLPRSALPREAVEWKGPVVGMSVREPGAAAPDLSEDIYHQLLANAADFMVDRYGAEVVFVPMERGV LDMQHSHAVVARMLRPQRASVLKGEYTPGQLMTLIGRFSFAVGMRLHFMIFSALQRVPFVALPYAAKVGGFIDRIGVGAP PLQLVNAGRLIAHIDRSWDRRRALIRQIDRALPTLQGAARQTHELMLRVLRGED >Mature_373_residues TARKQVFRIGIVGSYGGMNLGDEAILQSIVQQIRASVKAEITVFSRDAADTRARHAVDRTVSTRDASRAELLPFIEPLDL LLVGGGGILFDSEARVFLREAMIAREVGVPFMVYAIGAGPLEDRATLEAVRECLEDAKIVTVREASARQVLEAAGVRREI IVTADPALLLRPEPLPRSALPREAVEWKGPVVGMSVREPGAAAPDLSEDIYHQLLANAADFMVDRYGAEVVFVPMERGVL DMQHSHAVVARMLRPQRASVLKGEYTPGQLMTLIGRFSFAVGMRLHFMIFSALQRVPFVALPYAAKVGGFIDRIGVGAPP LQLVNAGRLIAHIDRSWDRRRALIRQIDRALPTLQGAARQTHELMLRVLRGED
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41094; Mature: 40963
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARKQVFRIGIVGSYGGMNLGDEAILQSIVQQIRASVKAEITVFSRDAADTRARHAVDR CCCHHCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHH TVSTRDASRAELLPFIEPLDLLLVGGGGILFDSEARVFLREAMIAREVGVPFMVYAIGAG HHHCCCCCHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC PLEDRATLEAVRECLEDAKIVTVREASARQVLEAAGVRREIIVTADPALLLRPEPLPRSA CCCHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCC LPREAVEWKGPVVGMSVREPGAAAPDLSEDIYHQLLANAADFMVDRYGAEVVFVPMERGV CCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC LDMQHSHAVVARMLRPQRASVLKGEYTPGQLMTLIGRFSFAVGMRLHFMIFSALQRVPFV HHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE ALPYAAKVGGFIDRIGVGAPPLQLVNAGRLIAHIDRSWDRRRALIRQIDRALPTLQGAAR ECCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QTHELMLRVLRGED HHHHHHHHHHCCCC >Mature Secondary Structure TARKQVFRIGIVGSYGGMNLGDEAILQSIVQQIRASVKAEITVFSRDAADTRARHAVDR CCHHCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHH TVSTRDASRAELLPFIEPLDLLLVGGGGILFDSEARVFLREAMIAREVGVPFMVYAIGAG HHHCCCCCHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC PLEDRATLEAVRECLEDAKIVTVREASARQVLEAAGVRREIIVTADPALLLRPEPLPRSA CCCHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCC LPREAVEWKGPVVGMSVREPGAAAPDLSEDIYHQLLANAADFMVDRYGAEVVFVPMERGV CCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC LDMQHSHAVVARMLRPQRASVLKGEYTPGQLMTLIGRFSFAVGMRLHFMIFSALQRVPFV HHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE ALPYAAKVGGFIDRIGVGAPPLQLVNAGRLIAHIDRSWDRRRALIRQIDRALPTLQGAAR ECCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH QTHELMLRVLRGED HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA