Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317486

Identifier: 74317486

GI number: 74317486

Start: 1552329

End: 1553510

Strand: Direct

Name: 74317486

Synonym: Tbd_1468

Alternate gene names: NA

Gene position: 1552329-1553510 (Clockwise)

Preceding gene: 74317485

Following gene: 74317488

Centisome position: 53.35

GC content: 70.98

Gene sequence:

>1182_bases
ATGGACGCGAGGCGCGCGGCGGCACCCGACCCGGATTTCGTACTACCCGATTACGCCGGCGGGGGTCTGGTCAACCTCAT
GAGTTCGATCACGACGGCGCTCGCGGATGGCAGCCCCTACCCGACACTCACGGCGCTGCCGCCCGAGACGCTCGCCGCCG
CCCGGCACGTGCTGATGCTCGTGGTCGACGGGCTGGGCAGCGCCTTTCTGGCGCGCCAGGGCGGGCCGCTGCGGCGCTGC
ATGCGCGCCGAGCTCACGTCGGTCTTTCCGTCAACGACGGCGAGCGCGATTCCGACCTTCCTGACCGGGCTCGCGCCGCA
GCAACACGGACTGACCGGCTGGCACATGTACTTCCGCGAGATCGGCGCGGTCGTCGCGCCACTTCCGTTCCGTCTGCGCA
CCGGACGCCAGGCGCTGCGCGATGCGGGCGTCTCGCCGGGTTCGCTGTTCGGACTCACGCCGCTGTTCGCCCGGCTGACG
CGCGCGAGCCACGTCGTCAGCCCGGAGAACATCGTGCATTCCGACTTCAACGTGGCGCTCGCGGGGCCGGCGCAGCGCTA
CGGCTACGACAGCCTCGAGGAGATGTTTGCGGTGCTGGCCGACCTGCTGCGCCGGCCCACGCCGAGCTACATCCACGCCT
ACTGGCCGCGGCTCGACAGCCTCGCGCACGAACACGGCGTCGACAGCGCCGAAGTCGTCGACGCCTTCAATGCGCTCAAT
GCGTCGTTCACGCGCCTGATCGAGTCCGCGCGCGACTGCGTCATCGTGGTCACCGCCGACCACGGCTTCATCGATTCACC
ACCCGGGGAAACGATCGATCTCGACGATCACCCCGCGCTGCGCGCGACGCTGCTCTTGCCGCTATGCGGCGAAGCCCGCG
CCGCCTACGCCTACGTGCGCGCCGGGCGCGAGGCCGAATTCGAGGCCTATCTCGCGGCGGAACTCGCCGACCGGGTGCGC
GTGTACCGGAGCGCGTCGCTCGTCCACGACGGCTGGTTCGGCCCCGGCGAAGCCCATCCCGCGCTCGGCGACCGCATCGG
CGACTACCTCCTGCTGCCGCGCGGGCGCGCGATCCTGCGCGACTGGCTGCTCGGCGAAGTGCGCCATGCCCATCTCGGCG
TGCACGGCGGCGCGTCGGCGGCAGAAATGCGGGTCCCGCTCGTGGTTGTGGTGCGCGACTGA

Upstream 100 bases:

>100_bases
CGCCCGCCCGCAGTTCACCGGCGAGGCCGTGTGACGGGCGCGCCGCACCGGCCCGCACTGCCCCGCTCGCGCTGAACGCC
GGCGAGGAACGTTTTTCGAC

Downstream 100 bases:

>100_bases
CTACCAGGGCATTTCGCTGCCGTCGAAACGGAAGAAACGCGCGTTCATCGACGGGTCGAATTTCTCGACCAGACGGCGCA
TGCCGCGAACGCTCTGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type I Phosphodiesterase / Nucleotide Pyrophosphatase; Phosphodiesterase; Phosphodiesterase I/Nucleotide Pyrophosphatase; Phosphodiesterase/Nucleotide Pyrophosphatase; Nucleotide Pyrophosphatase/Phosphodiesterase I; Type I Phosphodiesterase/Nucleotidepyro Phosphatase; Phosphodiesterase Protein; AP Superfamily Protein

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLMLVVDGLGSAFLARQGGPLRRC
MRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFREIGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLT
RASHVVSPENIVHSDFNVALAGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN
ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVRAGREAEFEAYLAAELADRVR
VYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILRDWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD

Sequences:

>Translated_393_residues
MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLMLVVDGLGSAFLARQGGPLRRC
MRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFREIGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLT
RASHVVSPENIVHSDFNVALAGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN
ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVRAGREAEFEAYLAAELADRVR
VYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILRDWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD
>Mature_393_residues
MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLMLVVDGLGSAFLARQGGPLRRC
MRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFREIGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLT
RASHVVSPENIVHSDFNVALAGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN
ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVRAGREAEFEAYLAAELADRVR
VYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILRDWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42332; Mature: 42332

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLML
CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHH
VVDGLGSAFLARQGGPLRRCMRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFRE
HHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
IGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLTRASHVVSPENIVHSDFNVAL
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEE
AGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN
CCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVR
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHHHHHHHH
AGREAEFEAYLAAELADRVRVYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHH
DWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD
HHHHHHHHHHHCCCCCCCCCCEEECCEEEEECC
>Mature Secondary Structure
MDARRAAAPDPDFVLPDYAGGGLVNLMSSITTALADGSPYPTLTALPPETLAAARHVLML
CCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHH
VVDGLGSAFLARQGGPLRRCMRAELTSVFPSTTASAIPTFLTGLAPQQHGLTGWHMYFRE
HHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
IGAVVAPLPFRLRTGRQALRDAGVSPGSLFGLTPLFARLTRASHVVSPENIVHSDFNVAL
HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEE
AGPAQRYGYDSLEEMFAVLADLLRRPTPSYIHAYWPRLDSLAHEHGVDSAEVVDAFNALN
CCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ASFTRLIESARDCVIVVTADHGFIDSPPGETIDLDDHPALRATLLLPLCGEARAAYAYVR
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHHHHHHHH
AGREAEFEAYLAAELADRVRVYRSASLVHDGWFGPGEAHPALGDRIGDYLLLPRGRAILR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCHHHHH
DWLLGEVRHAHLGVHGGASAAEMRVPLVVVVRD
HHHHHHHHHHHCCCCCCCCCCEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA