| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is prs [H]
Identifier: 74317483
GI number: 74317483
Start: 1549634
End: 1550617
Strand: Direct
Name: prs [H]
Synonym: Tbd_1465
Alternate gene names: 74317483
Gene position: 1549634-1550617 (Clockwise)
Preceding gene: 74317481
Following gene: 74317485
Centisome position: 53.26
GC content: 69.82
Gene sequence:
>984_bases ATGGGACGCGAAGAACTCTGCCTGTTCAGCCTCAACGCGAGCCGCGGCCTCGGCGAGCGCATTGCCGCCCGGCTCGGCCA GCCGCTGGCCGAGCACGAGGAGCGTGAGTTCGAGGACGGCGAACACAAGGCACGCCCGCTCGAGAGCGTGCGCGGCCGCG ACGTCTACGTCGTGCAGTCGCTCCATGGCGAACCGGGTTCTAGCGCCAACGACAAGCTGATTCGGCTGCTGTTCTTCATC GCGACGCTCAAGGACGCCTCGGCCGCACGCGTCACGGCGGTCGTCCCCTACCTCGCCTACGCGCGCAAGGACCGTCGCAG CAAACCGCGTGATCCGGTCGGCAGCCGCTACGTCGCGCAGCTGTTCGAGAGCCTCGGAACCGACCGCATCGTGAGTCTCG ACGTCCACAATCTCGCCGCCTACCAGAACGCGTTCCGCATCCCGGTCGAACATCTCGAAGCGCGGCCGCTCTTCGTCGCG CATTTCGCCCCGGCGTTCGCAAACGACGACGTCGTGGTGGTCTCGCCCGACGTCGGCGGCGCCAAGCGCGCCGAGGCCCT GCGCGCCTCCCTTTCACGCCGCATCGGGCGTCCCGCAGGCATGGCGTTCATCGAAAAATACCGCAGCGGCGGCATCGTCT CGGGGGAAGCCGTCGTCGGCGACGTCGACGGCAAGCACGTCCTCATCGTCGACGACCTCGTCAGCAGCGGCACCACGCTC GCCCGCGCGGCCGCCGCCTGCCGTAGCCGCGGCGCCACACGCGTCCTCGCCGTCGCGACGCACGGCGTGTTCGGCGGCGA TGCCGTGCGCACCCTCGGTGACAGTGCGCTCGACGCGCTCGTCGTCACCGACAGCATCCCCACCTCGCACCTGCCGCCGC CACTGGGCGAGCGCGTCGAAATCCTCGACATCGCGCCGCTCTTCGCCGAGGCGATCCGGCGGCTGCACGAAGCACGCTCG CTCGGCGATCTGCTCGGCGATTAG
Upstream 100 bases:
>100_bases TCCGAGCCCTGCGCTTTCGGTCCACGACCCCTCCCCTCGCGCGCCCGCTCTCAGCTTGGCATACGATGAAAGTACCGCCA GTCTCCCGTCGGAAAAAGCC
Downstream 100 bases:
>100_bases CGCAGCGTCGCCCTGGCGATGTGGCGCTCGGCCAGTTCGAGATAGTCGTGCGCGAGGGCCGGCCATCTCGCGGGCGGATG GCGGCCGTCATCGTCCTTGA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MGREELCLFSLNASRGLGERIAARLGQPLAEHEEREFEDGEHKARPLESVRGRDVYVVQSLHGEPGSSANDKLIRLLFFI ATLKDASAARVTAVVPYLAYARKDRRSKPRDPVGSRYVAQLFESLGTDRIVSLDVHNLAAYQNAFRIPVEHLEARPLFVA HFAPAFANDDVVVVSPDVGGAKRAEALRASLSRRIGRPAGMAFIEKYRSGGIVSGEAVVGDVDGKHVLIVDDLVSSGTTL ARAAAACRSRGATRVLAVATHGVFGGDAVRTLGDSALDALVVTDSIPTSHLPPPLGERVEILDIAPLFAEAIRRLHEARS LGDLLGD
Sequences:
>Translated_327_residues MGREELCLFSLNASRGLGERIAARLGQPLAEHEEREFEDGEHKARPLESVRGRDVYVVQSLHGEPGSSANDKLIRLLFFI ATLKDASAARVTAVVPYLAYARKDRRSKPRDPVGSRYVAQLFESLGTDRIVSLDVHNLAAYQNAFRIPVEHLEARPLFVA HFAPAFANDDVVVVSPDVGGAKRAEALRASLSRRIGRPAGMAFIEKYRSGGIVSGEAVVGDVDGKHVLIVDDLVSSGTTL ARAAAACRSRGATRVLAVATHGVFGGDAVRTLGDSALDALVVTDSIPTSHLPPPLGERVEILDIAPLFAEAIRRLHEARS LGDLLGD >Mature_326_residues GREELCLFSLNASRGLGERIAARLGQPLAEHEEREFEDGEHKARPLESVRGRDVYVVQSLHGEPGSSANDKLIRLLFFIA TLKDASAARVTAVVPYLAYARKDRRSKPRDPVGSRYVAQLFESLGTDRIVSLDVHNLAAYQNAFRIPVEHLEARPLFVAH FAPAFANDDVVVVSPDVGGAKRAEALRASLSRRIGRPAGMAFIEKYRSGGIVSGEAVVGDVDGKHVLIVDDLVSSGTTLA RAAAACRSRGATRVLAVATHGVFGGDAVRTLGDSALDALVVTDSIPTSHLPPPLGERVEILDIAPLFAEAIRRLHEARSL GDLLGD
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI28557709, Length=323, Percent_Identity=36.8421052631579, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI4506129, Length=324, Percent_Identity=36.1111111111111, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI4506127, Length=321, Percent_Identity=36.4485981308411, Blast_Score=194, Evalue=9e-50, Organism=Homo sapiens, GI84875539, Length=327, Percent_Identity=35.7798165137615, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI4506133, Length=354, Percent_Identity=28.8135593220339, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI194018537, Length=367, Percent_Identity=27.2479564032698, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI1787458, Length=323, Percent_Identity=37.1517027863777, Blast_Score=197, Evalue=1e-51, Organism=Caenorhabditis elegans, GI25149168, Length=320, Percent_Identity=35, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17554704, Length=320, Percent_Identity=35, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17554702, Length=320, Percent_Identity=35, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71989924, Length=320, Percent_Identity=35, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17570245, Length=346, Percent_Identity=27.4566473988439, Blast_Score=128, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6320946, Length=326, Percent_Identity=35.8895705521472, Blast_Score=194, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319403, Length=331, Percent_Identity=35.9516616314199, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6321776, Length=329, Percent_Identity=34.3465045592705, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322667, Length=185, Percent_Identity=34.0540540540541, Blast_Score=96, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=40.3508771929825, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI21355239, Length=325, Percent_Identity=36.3076923076923, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI45551540, Length=348, Percent_Identity=33.9080459770115, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI24651458, Length=322, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI24651456, Length=322, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI281362873, Length=322, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24651454, Length=322, Percent_Identity=28.5714285714286, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24651462, Length=109, Percent_Identity=36.697247706422, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24651464, Length=109, Percent_Identity=36.697247706422, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI45552010, Length=109, Percent_Identity=36.697247706422, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 35119; Mature: 34988
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGREELCLFSLNASRGLGERIAARLGQPLAEHEEREFEDGEHKARPLESVRGRDVYVVQS CCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCHHHHCCCCEEEEEE LHGEPGSSANDKLIRLLFFIATLKDASAARVTAVVPYLAYARKDRRSKPRDPVGSRYVAQ CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LFESLGTDRIVSLDVHNLAAYQNAFRIPVEHLEARPLFVAHFAPAFANDDVVVVSPDVGG HHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHCCCCEEEEECCHHCCCCCEEEECCCCCC AKRAEALRASLSRRIGRPAGMAFIEKYRSGGIVSGEAVVGDVDGKHVLIVDDLVSSGTTL HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCEEEECCCCCEEEEEECHHHCCHHH ARAAAACRSRGATRVLAVATHGVFGGDAVRTLGDSALDALVVTDSIPTSHLPPPLGERVE HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEE ILDIAPLFAEAIRRLHEARSLGDLLGD EEEHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GREELCLFSLNASRGLGERIAARLGQPLAEHEEREFEDGEHKARPLESVRGRDVYVVQS CCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCHHHHCCCCEEEEEE LHGEPGSSANDKLIRLLFFIATLKDASAARVTAVVPYLAYARKDRRSKPRDPVGSRYVAQ CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LFESLGTDRIVSLDVHNLAAYQNAFRIPVEHLEARPLFVAHFAPAFANDDVVVVSPDVGG HHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHCCCCEEEEECCHHCCCCCEEEECCCCCC AKRAEALRASLSRRIGRPAGMAFIEKYRSGGIVSGEAVVGDVDGKHVLIVDDLVSSGTTL HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCEEEECCCCCEEEEEECHHHCCHHH ARAAAACRSRGATRVLAVATHGVFGGDAVRTLGDSALDALVVTDSIPTSHLPPPLGERVE HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEE ILDIAPLFAEAIRRLHEARSLGDLLGD EEEHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]