Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317470

Identifier: 74317470

GI number: 74317470

Start: 1535510

End: 1536235

Strand: Direct

Name: 74317470

Synonym: Tbd_1452

Alternate gene names: NA

Gene position: 1535510-1536235 (Clockwise)

Preceding gene: 74317469

Following gene: 74317471

Centisome position: 52.77

GC content: 66.67

Gene sequence:

>726_bases
ATGCACCCGATCACCTTCCGCCTGCCGATCAAGATCCTGCCGCAGCCGGACGAGACGACCTGCGGGCCGACCTGCCTGCA
TGCCGTCTACCGTTACTGGGGCGACGACGTCCCGCTTTCGGCGGTGATCGACCGCACGCACCGCCTCGAACACGGCGGCA
CCTTCGCGATTTTTCTGGCCTGCGACGCGCTGCGCCACGGCTATGAAGCGACGATCTACACCTACAACCTCACGGTCTTC
GACCCGAGCTGGTTCAAACCCGGCGTCGACATCGCCGAGCGGCTTGCGCGCCAGCGCGAGCTCAAGCACGACACGCGGCT
CCAGCACGTCACCGAGGGCTACCTCGAATTCCTCAGACTGGGCGGCAAGCTGCGCCTGACCGACCTGTCGCGACCGCTGA
TCAAGGGCCTCCTGCGGCGCAATCTGCCGATCATCACCGGGCTCAGTTCGACCTACCTCTACCGTGCGATGCGCGAACAC
GGCCCCGACGACCAGCCTGACGATCTGCGCGGCCTGCCGTCCGGCCATTTCGTCGTGATCGCCGGCTACGACCGCGAGCG
CCATACCCTGCTCGTCGCCGACCCTTACTCGCGCCACCCCTACACGCCGTCGCACGAGTATTGGGTCAGCATCGACCGCG
TCATCGGCGCGGTGCTGCTCGGCATCGTCACCCACGATGCCAACCTGCTGTTCATCTATCCGCCGCGCGCGTTGCCGCGG
GCCTGA

Upstream 100 bases:

>100_bases
CCATGCGCGCGATGCCGCCCCGGGCCTGCCGCAGCGCGGCACCCCGCACGGCGCGCTTGCGAGCGCCGCGTCCATTCAAC
ACGAGGCAAGGATCCGTCCG

Downstream 100 bases:

>100_bases
ACGTGCGCGTCCTCATCGTCGTCGACGACCCGCCCGACTGGCCCCTCGACATCCCCGGCATCGGGGTCGTCGCGGCCGAG
GCCTATCTGACCGACCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLACDALRHGYEATIYTYNLTVF
DPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRLGGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREH
GPDDQPDDLRGLPSGHFVVIAGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR
A

Sequences:

>Translated_241_residues
MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLACDALRHGYEATIYTYNLTVF
DPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRLGGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREH
GPDDQPDDLRGLPSGHFVVIAGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR
A
>Mature_241_residues
MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLACDALRHGYEATIYTYNLTVF
DPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRLGGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREH
GPDDQPDDLRGLPSGHFVVIAGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27557; Mature: 27557

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLA
CCCEEEEECEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEE
CDALRHGYEATIYTYNLTVFDPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRL
EHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREHGPDDQPDDLRGLPSGHFVVI
CCEEEEEHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEE
AGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR
EECCCCCCEEEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
A
C
>Mature Secondary Structure
MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLA
CCCEEEEECEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEE
CDALRHGYEATIYTYNLTVFDPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRL
EHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREHGPDDQPDDLRGLPSGHFVVI
CCEEEEEHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEE
AGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR
EECCCCCCEEEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA