| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317470
Identifier: 74317470
GI number: 74317470
Start: 1535510
End: 1536235
Strand: Direct
Name: 74317470
Synonym: Tbd_1452
Alternate gene names: NA
Gene position: 1535510-1536235 (Clockwise)
Preceding gene: 74317469
Following gene: 74317471
Centisome position: 52.77
GC content: 66.67
Gene sequence:
>726_bases ATGCACCCGATCACCTTCCGCCTGCCGATCAAGATCCTGCCGCAGCCGGACGAGACGACCTGCGGGCCGACCTGCCTGCA TGCCGTCTACCGTTACTGGGGCGACGACGTCCCGCTTTCGGCGGTGATCGACCGCACGCACCGCCTCGAACACGGCGGCA CCTTCGCGATTTTTCTGGCCTGCGACGCGCTGCGCCACGGCTATGAAGCGACGATCTACACCTACAACCTCACGGTCTTC GACCCGAGCTGGTTCAAACCCGGCGTCGACATCGCCGAGCGGCTTGCGCGCCAGCGCGAGCTCAAGCACGACACGCGGCT CCAGCACGTCACCGAGGGCTACCTCGAATTCCTCAGACTGGGCGGCAAGCTGCGCCTGACCGACCTGTCGCGACCGCTGA TCAAGGGCCTCCTGCGGCGCAATCTGCCGATCATCACCGGGCTCAGTTCGACCTACCTCTACCGTGCGATGCGCGAACAC GGCCCCGACGACCAGCCTGACGATCTGCGCGGCCTGCCGTCCGGCCATTTCGTCGTGATCGCCGGCTACGACCGCGAGCG CCATACCCTGCTCGTCGCCGACCCTTACTCGCGCCACCCCTACACGCCGTCGCACGAGTATTGGGTCAGCATCGACCGCG TCATCGGCGCGGTGCTGCTCGGCATCGTCACCCACGATGCCAACCTGCTGTTCATCTATCCGCCGCGCGCGTTGCCGCGG GCCTGA
Upstream 100 bases:
>100_bases CCATGCGCGCGATGCCGCCCCGGGCCTGCCGCAGCGCGGCACCCCGCACGGCGCGCTTGCGAGCGCCGCGTCCATTCAAC ACGAGGCAAGGATCCGTCCG
Downstream 100 bases:
>100_bases ACGTGCGCGTCCTCATCGTCGTCGACGACCCGCCCGACTGGCCCCTCGACATCCCCGGCATCGGGGTCGTCGCGGCCGAG GCCTATCTGACCGACCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLACDALRHGYEATIYTYNLTVF DPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRLGGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREH GPDDQPDDLRGLPSGHFVVIAGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR A
Sequences:
>Translated_241_residues MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLACDALRHGYEATIYTYNLTVF DPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRLGGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREH GPDDQPDDLRGLPSGHFVVIAGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR A >Mature_241_residues MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLACDALRHGYEATIYTYNLTVF DPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRLGGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREH GPDDQPDDLRGLPSGHFVVIAGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27557; Mature: 27557
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLA CCCEEEEECEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEE CDALRHGYEATIYTYNLTVFDPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRL EHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREHGPDDQPDDLRGLPSGHFVVI CCEEEEEHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEE AGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR EECCCCCCEEEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCC A C >Mature Secondary Structure MHPITFRLPIKILPQPDETTCGPTCLHAVYRYWGDDVPLSAVIDRTHRLEHGGTFAIFLA CCCEEEEECEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEE CDALRHGYEATIYTYNLTVFDPSWFKPGVDIAERLARQRELKHDTRLQHVTEGYLEFLRL EHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGKLRLTDLSRPLIKGLLRRNLPIITGLSSTYLYRAMREHGPDDQPDDLRGLPSGHFVVI CCEEEEEHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEE AGYDRERHTLLVADPYSRHPYTPSHEYWVSIDRVIGAVLLGIVTHDANLLFIYPPRALPR EECCCCCCEEEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA